RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LRRN2O75325 713 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TJP3O95049 919 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PPARGP37231 505 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 EPHB4P54760 987 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GLE1Q53GS7 698 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SH2D4BQ5SQS7 431 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CEP85LQ5SZL2 805 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PCGF5Q86SE9 256 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SMYD4Q8IYR2 804 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TTC13Q8NBP0 860 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ZNF280CQ8ND82 737 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 FAM71BQ8TC56 605 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 KATNAL1Q9BW62 490 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 EDEM3Q9BZQ6 932 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PCIF1Q9H4Z3 704 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RAVER2Q9HCJ3 691 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PCDHA10Q9Y5I2 948 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 NWD1Q149M9 1564 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CCDC188H7C350 402 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SGO2Q562F6 1265 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CATSPER4Q7RTX7 472 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 FAM133AQ8N9E0 248 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 KCTD6Q8NC69 237 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 URGCPQ8TCY9 931 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TEX13BQ9BXU2 312 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CCSER1Q9C0I3 900 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 KLHL14Q9P2G3 628 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PCDHA13Q9Y5I0 950 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SLC25A27O95847 323 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 INHBAP08476 426 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PPP4CP60510 307 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TAP1Q03518 808 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ITKQ08881 620 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PPP2R5DQ14738 602 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CEP55Q53EZ4 464 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 KAZNQ674X7 775 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PLCD3Q8N3E9 789 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 VPS33BQ9H267 617 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RPAP3Q9H6T3 665 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SAMSN1Q9NSI8 373 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 STXBP3O00186 592 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 HEXIM1O94992 359 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ZBTB7AO95365 584 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 NR3C1P04150 777 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ELF1P32519 619 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CACNB3P54284 484 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RPS6KA2Q15349 733 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SLC10A5Q5PT55 438 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 DSTYKQ6XUX3 929 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 NDUFAF2Q8N183 169 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 C7orf31Q8N865 590 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 WHAMMQ8TF30 809 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TACC3Q9Y6A5 838 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 UBE4BO95155 1302 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SYNGAP1Q96PV0 1343 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 LGALS16A8MUM7 142 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ECEL1O95672 775 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 MYBL1P10243 752 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 EIF3BP55884 814 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CUL1Q13616 776 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 MXD4Q14582 209 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 KRT31Q15323 416 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TTBK2Q6IQ55 1244 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 FRMD5Q7Z6J6 570 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 PHLDB2Q86SQ0 1253 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 FMR1NBQ8N0W7 255 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RNF10Q8N5U6 811 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 HEXIM2Q96MH2 286 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 VCX3BQ9H321 246 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SART1O43290 800 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GFPT2O94808 682 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 EYA4O95677 639 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GOLGA8FQ08AF8 430 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GOLGA8DPQ0D2H9 430 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TTC31Q49AM3 519 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ERICH1Q86X53 443 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RBM41Q96IZ5 413 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RILPQ96NA2 401 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 AIFM3Q96NN9 605 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 NXF1Q9UBU9 619 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 CNOT7Q9UIV1 285 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 AFG3L2Q9Y4W6 797 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 U2AF2P26368 475 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 ZNF543Q08ER8 600 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 SNAPC2Q13487 334 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TOGARAM2Q6ZUX3 1019 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 EEPD1Q7L9B9 569 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 TMEM35BQ8NCS4 154 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 FAM149B1Q96BN6 582 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 RSRC1Q96IZ7 334 aaKnown RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 GCOM2Q9BZD3 368 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 JPH1Q9HDC5 661 aaPredicted RBP5.24□□□□□ -1.57
SCN3A-202ENST00000360093 DAGLAQ9Y4D2 1042 aa5.24□□□□□ -1.57
SCN3A-202ENST00000360093 MYL3P08590 195 aa5.23□□□□□ -1.57
SCN3A-202ENST00000360093 INPP5BP32019 993 aa5.23□□□□□ -1.57
SCN3A-202ENST00000360093 USP17L6PQ6QN14 398 aa5.23□□□□□ -1.57
SCN3A-202ENST00000360093 PNMA8AQ86V59 439 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms