RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
PTPN11-201ENST00000351677 NFRKBQ6P4R8 1299 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 PADI6Q6TGC4 694 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 ARHGEF18Q6ZSZ5 1173 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 RHOT2Q8IXI1 618 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 PRPSAP1Q14558 356 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 MTF1Q14872 753 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 RCSD1Q6JBY9 416 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 EXOC1LA0A1B0GW35 172 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 WDR91A4D1P6 747 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 ZWINTO95229 277 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 EMBQ6PCB8 327 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
PTPN11-201ENST00000351677 RXRBP28702 533 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 SLC8A1P32418 973 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 QRICH1Q2TAL8 776 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 RMDN3Q96TC7 470 aa17.25■□□□□ 0.35
PTPN11-201ENST00000351677 CUL1Q13616 776 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 SNX24Q9Y343 169 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 TAF6LQ9Y6J9 622 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 SLC16A4O15374 487 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
PTPN11-201ENST00000351677 KNOP1Q1ED39 458 aaKnown RBP17.24■□□□□ 0.35
PTPN11-201ENST00000351677 BBS9Q3SYG4 887 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 PASD1Q8IV76 773 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 CFAP36Q96G28 342 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 ORC4O43929 436 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 ABCD1P33897 745 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 RPF1Q9H9Y2 349 aaKnown RBP17.24■□□□□ 0.35
PTPN11-201ENST00000351677 ANAPC7Q9UJX3 599 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 CDO1Q16878 200 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
PTPN11-201ENST00000351677 MT-ND3P03897 115 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 TRIM28Q13263 835 aaKnown RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 MAP3K21Q5TCX8 1036 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 THNSL1Q8IYQ7 743 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 HSPH1Q92598 858 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 CNOT10Q9H9A5 744 aaKnown RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 SERPINB6P35237 376 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 PPP1R2P3Q6NXS1 205 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 CCDC68Q9H2F9 335 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 AKR1B1P15121 316 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 EFCAB13Q8IY85 973 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 HPS3Q969F9 1004 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 KCNF1Q9H3M0 494 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 F5H6K3 240 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 SART1O43290 800 aaKnown RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 ARL4AP40617 200 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 KLRC3Q07444 240 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 E2F5Q15329 346 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 ERICH1Q86X53 443 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 IGDCC4Q8TDY8 1250 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 GBP5Q96PP8 586 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 HEMGNQ9BXL5 484 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 CNOT8Q9UFF9 292 aaKnown RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 PACSIN2Q9UNF0 486 aaPredicted RBP17.23■□□□□ 0.35
PTPN11-201ENST00000351677 JAK3P52333 1124 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 XXYLT1Q8NBI6 393 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
PTPN11-201ENST00000351677 A0A0G2JLW4 131 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 EXOC8Q8IYI6 725 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 OSBPL9Q96SU4 736 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 IFT122Q9HBG6 1241 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 CCDC188H7C350 402 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 OPHN1O60890 802 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 CPSF2Q9P2I0 782 aaKnown RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 RPSAP08865 295 aaKnown RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 PLS3P13797 630 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 GGCXP38435 758 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 PDCLQ13371 301 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 MCUQ8NE86 351 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 ASPHQ12797 758 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 MMEL1Q495T6 779 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 AP5M1Q9H0R1 490 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 ESYT3A0FGR9 886 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 FRMD3A2A2Y4 597 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 EIF3BP55884 814 aaKnown RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 ANKRD40Q6AI12 368 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 TMED8Q6PL24 325 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-201ENST00000351677 FAM213AQ9BRX8 229 aa17.22■□□□□ 0.35
PTPN11-201ENST00000351677 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 PSMA2P25787 234 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms