RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KIAA0895Q8NCT3 520 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 FGFBP2Q9BYJ0 223 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 PCDHA2Q9Y5H9 948 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
CXCL12-201ENST00000343575 RSPH10B2B2RC85 870 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 AP5Z1O43299 807 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 RSPH10BP0C881 870 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 PRCPP42785 496 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 NPEPPSP55786 919 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 PLA2G4FQ68DD2 849 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 DHX37Q8IY37 1157 aaKnown RBP16.31■□□□□ 0.2
CXCL12-201ENST00000343575 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
CXCL12-201ENST00000343575 BACH1O14867 736 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 IDEP14735 1019 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 TCF7P36402 384 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-201ENST00000343575 CENPFP49454 3210 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 FLT3LGP49771 235 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 CBX1P83916 185 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 COASYQ13057 564 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 MAPK7Q13164 816 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 AOPEPQ8N6M6 819 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 ATP6V0A1Q93050 837 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 PANK4Q9NVE7 773 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 LOXHD1Q8IVV2 1947 aa16.3■□□□□ 0.2
CXCL12-201ENST00000343575 LGR5O75473 907 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 XRCC5P13010 732 aaKnown RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 PRKCEQ02156 737 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 PRKCZQ05513 592 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 DUSP28Q4G0W2 176 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 DAW1Q8N136 415 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ADSSL1Q8N142 457 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 AFAP1L1Q8TED9 768 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ZNF302Q9NR11 478 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ANKEF1Q9NU02 776 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 EXOC1Q9NV70 894 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ZHX1Q9UKY1 873 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 TRIM50Q86XT4 487 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 TRIB2Q92519 343 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ARID3AQ99856 593 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-201ENST00000343575 PYCARDQ9ULZ3 195 aa16.29■□□□□ 0.2
CXCL12-201ENST00000343575 ARHGEF35A5YM69 484 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 SFI1A8K8P3 1242 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 GUCY2CP25092 1073 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-201ENST00000343575 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
CXCL12-201ENST00000343575 IRF5Q13568 498 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 TRMT44Q8IYL2 757 aaKnown RBP16.28■□□□□ 0.2
CXCL12-201ENST00000343575 FIZ1Q96SL8 496 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 PDLIM7Q9NR12 457 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 KCND2Q9NZV8 630 aa16.28■□□□□ 0.2
CXCL12-201ENST00000343575 GNEQ9Y223 722 aaKnown RBP16.28■□□□□ 0.2
CXCL12-201ENST00000343575 HTTP42858 3142 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 GPR25O00155 361 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 IKBKBO14920 756 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 GH1P01241 217 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 CDC25BP30305 580 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 STAT5BP51692 787 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 ZNF131P52739 623 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 FAM193AP78312 1265 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 PLCB2Q00722 1185 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 LAMC2Q13753 1193 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 XKR9Q5GH70 373 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 XKR3Q5GH77 459 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 CT47A1Q5JQC4 288 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-201ENST00000343575 KLHL10Q6JEL2 608 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 TRPV1Q8NER1 839 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 TBC1D7Q9P0N9 293 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 ARID2Q68CP9 1835 aa16.27■□□□□ 0.2
CXCL12-201ENST00000343575 KRT18P05783 430 aaKnown RBP16.27■□□□□ 0.19
CXCL12-201ENST00000343575 CASP5P51878 434 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 STX17P56962 302 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 HERC4Q5GLZ8 1057 aaPredicted RBP16.27■□□□□ 0.19
CXCL12-201ENST00000343575 SFR1Q86XK3 245 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 CCDC65Q8IXS2 484 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 C17orf53Q8N3J3 647 aaPredicted RBP16.27■□□□□ 0.19
CXCL12-201ENST00000343575 PPTC7Q8NI37 304 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 ENOX1Q8TC92 643 aaKnown RBP16.27■□□□□ 0.19
CXCL12-201ENST00000343575 CD99L2Q8TCZ2 262 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 AFG1LQ8WV93 481 aa16.27■□□□□ 0.19
CXCL12-201ENST00000343575 LENG1Q96BZ8 264 aaPredicted RBP16.27■□□□□ 0.19
CXCL12-201ENST00000343575 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
CXCL12-201ENST00000343575 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms