RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PGBD1Q96JS3 809 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
FN1-202ENST00000336916 MYH1P12882 1939 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 MYH4Q9Y623 1939 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 ANKRD26Q9UPS8 1709 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 CCDC188H7C350 402 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
FN1-202ENST00000336916 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
FN1-202ENST00000336916 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
FN1-202ENST00000336916 ADCY2Q08462 1091 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 ZNF699Q32M78 642 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 MTBPQ96DY7 904 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 CAPS2Q9BXY5 557 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 TEKT2Q9UIF3 430 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 PIK3C2BO00750 1634 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 ZBED6P86452 979 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 TBC1D9BQ66K14 1250 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 GANCQ8TET4 914 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 RUBCNQ92622 972 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 CHMP6Q96FZ7 201 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 CALN1Q9BXU9 219 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 SPATA31A6Q5VVP1 1343 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 MMP19Q99542 508 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 NEXMIFQ5QGS0 1516 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 HOXC6P09630 235 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 EFNA5P52803 228 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 LSG1Q9H089 658 aaKnown RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 DPYSL4O14531 572 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 GNGT2O14610 69 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 PRELPP51888 382 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 ZNF560Q96MR9 790 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 DYRK4Q9NR20 520 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 INTS9Q9NV88 658 aaKnown RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 KCND2Q9NZV8 630 aa13.15□□□□□ -0.3
FN1-202ENST00000336916 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.3
FN1-202ENST00000336916 GSTA4O15217 222 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 SERPINB6P35237 376 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 USP11P51784 963 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 PHEXP78562 749 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.31
FN1-202ENST00000336916 MGARPQ8TDB4 240 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.31
FN1-202ENST00000336916 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.31
FN1-202ENST00000336916 UBE2TQ9NPD8 197 aaPredicted RBP13.15□□□□□ -0.31
FN1-202ENST00000336916 MTMR6Q9Y217 621 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.31
FN1-202ENST00000336916 JCADQ9P266 1359 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 ADORA1P30542 326 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 ERICH1Q86X53 443 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 PFASO15067 1338 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 CRKP46108 304 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 ART3Q13508 389 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 GGPS1O95749 300 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 KRT1P04264 644 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 NOP14P78316 857 aaKnown RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 MB21D1Q8N884 522 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 FTOQ9C0B1 505 aaKnown RBP eCLIP13.14□□□□□ -0.31
FN1-202ENST00000336916 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 PSMA2P25787 234 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 CCDC24Q8N4L8 307 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 KRT37O76014 449 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 RASSF7Q02833 373 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 SUN2Q9UH99 717 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 DLG5Q8TDM6 1919 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 ATP5HO75947 161 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 PLCG1P19174 1290 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 SOX5P35711 763 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 ELF2Q15723 593 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 UNC13DQ70J99 1090 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 OLA1Q9NTK5 396 aaKnown RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 DNAJC17Q9NVM6 304 aaKnown RBP13.14□□□□□ -0.31
FN1-202ENST00000336916 NDE1Q9NXR1 346 aa13.14□□□□□ -0.31
FN1-202ENST00000336916 RASGRF2O14827 1237 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 ZNF18P17022 549 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 TSTA3Q13630 321 aaPredicted RBP13.13□□□□□ -0.31
FN1-202ENST00000336916 TFDP2Q14188 446 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PIDD1Q9HB75 910 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 SAT1P21673 171 aa13.13□□□□□ -0.31
FN1-202ENST00000336916 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms