RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FRMD3A2A2Y4 597 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 DAPK3O43293 454 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 CHMP2AO43633 222 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 NR3C1P04150 777 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 HDLBPQ00341 1268 aaKnown RBP18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 DDR1Q08345 913 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 PEX26Q7Z412 305 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 TPCN2Q8NHX9 752 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 ATP6V1G3Q96LB4 118 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 DNM3Q9UQ16 869 aa18.97■□□□□ 0.63
PTP4A3-201ENST00000329397 EML1O00423 815 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 EDRF1Q3B7T1 1238 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 SLFN13Q68D06 897 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 DAAM2Q86T65 1068 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 SIX2Q9NPC8 291 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 TMEM59LQ9UK28 342 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 KRIT1O00522 736 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 DDX3XO00571 662 aaKnown RBP eCLIP18.96■□□□□ 0.632e-14■■■■□ 20.6
PTP4A3-201ENST00000329397 TTI1O43156 1089 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 TMOD1P28289 359 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 NMT1P30419 496 aaKnown RBP18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 CTTNQ14247 550 aaKnown RBP18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 EPHA7Q15375 998 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 KDM7AQ6ZMT4 941 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 UBLCP1Q8WVY7 318 aaPredicted RBP18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 SLC35C1Q96A29 364 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 LENG9Q96B70 501 aa18.96■□□□□ 0.63
PTP4A3-201ENST00000329397 DDTLA6NHG4 134 aaPredicted RBP18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 DCDC2CA8MYV0 355 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 INPP5BP32019 993 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 UBXN2AP68543 259 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 SPICE1Q8N0Z3 855 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 IGSF9BQ9UPX0 1349 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 MYO1FO00160 1098 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 SF3A3Q12874 501 aaKnown RBP eCLIP18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 PRPF4BQ13523 1007 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 APOBEC3HQ6NTF7 200 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 FOXR2Q6PJQ5 311 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 KIAA0825Q8IV33 1275 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 GLYCTKQ8IVS8 523 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 ZC3H3Q8IXZ2 948 aaKnown RBP18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 WHAMMQ8TF30 809 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 TRIM51Q9BSJ1 452 aa18.95■□□□□ 0.62
PTP4A3-201ENST00000329397 E7EVH7 732 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 PPP1R37O75864 691 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 CTNNA1P35221 906 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 ITGB3BPQ13352 177 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 VPS72Q15906 364 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 SCFD2Q8WU76 684 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 ISCUQ9H1K1 167 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.94■□□□□ 0.621e-6■■■■■ 40.8
PTP4A3-201ENST00000329397 FBXL5Q9UKA1 691 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 TRAF3IP3Q9Y228 551 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 CAPN7Q9Y6W3 813 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 PGRMC1O00264 195 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 HLA-DOAP06340 250 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 HSPA9P38646 679 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 MREGQ8N565 214 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 SYT2Q8N9I0 419 aaPredicted RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 DBNDD1Q9H9R9 158 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 SEPT11Q9NVA2 429 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
PTP4A3-201ENST00000329397 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 MSH4O15457 936 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 BBOX1O75936 387 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 PTGISQ16647 500 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ICE2Q659A1 982 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 LNX1Q8TBB1 728 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ZNF473Q8WTR7 871 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ZC3H12CQ9C0D7 883 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 CHORDC1Q9UHD1 332 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 PITPNM2Q9BZ72 1349 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 TRIM49P0CI25 452 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 TRIM49CP0CI26 452 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 MDH1P40925 334 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 RBM5P52756 815 aaKnown RBP eCLIP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 GALCP54803 685 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ZNF211Q13398 564 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 CHADLQ6NUI6 762 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 EPM2AIP1Q7L775 607 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 PALB2Q86YC2 1186 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 SLFN12Q8IYM2 578 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 RDH13Q8NBN7 331 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 EPN3Q9H201 632 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 EVI5O60447 810 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 FLOT1O75955 427 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 H2AFZP0C0S5 128 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ZBTB48P10074 688 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 RPA1P27694 616 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 ZNF844Q08AG5 666 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 PLS1Q14651 629 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 RNF187Q5TA31 235 aaPredicted RBP18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 H2AFVQ71UI9 128 aa18.93■□□□□ 0.62
PTP4A3-201ENST00000329397 SIAH1Q8IUQ4 282 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms