RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 SERTAD1Q9UHV2 236 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ZNF180Q9UJW8 692 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 TMCO1Q9UM00 188 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 GMEB1Q9Y692 573 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 PAK2Q13177 524 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 TRADDQ15628 312 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 SPATA4Q8NEY3 305 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 RAPGEF5Q92565 580 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 IRF2BPLQ9H1B7 796 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ALDH8A1Q9H2A2 487 aaPredicted RBP11.19□□□□□ -0.62
SF3B2-201ENST00000322535 ABCF3Q9NUQ8 709 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 CROTQ9UKG9 612 aa11.19□□□□□ -0.62
SF3B2-201ENST00000322535 SEMA3EO15041 775 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 PPIP5K2O43314 1243 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 TPPPO94811 219 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 IL1R1P14778 569 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 VARSP26640 1264 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 MLH1P40692 756 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SARSP49591 514 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 PAPD7Q5XG87 772 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 THOC7Q6I9Y2 204 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 DUS1LQ6P1R4 473 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SLC17A8Q8NDX2 589 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 MDM1Q8TC05 714 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 FGD4Q96M96 766 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 CRNKL1Q9BZJ0 848 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 NDST4Q9H3R1 872 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SWAP70Q9UH65 585 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 GGA2Q9UJY4 613 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 CEP131Q9UPN4 1083 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 RCCD1A6NED2 376 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 TRAPPC3O43617 180 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 ECE2O60344 883 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 ZFXP17010 805 aaPredicted RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 TRIM21P19474 475 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 KCNA3P22001 575 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SP100P23497 879 aaPredicted RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 ALDH5A1P51649 535 aaPredicted RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 HLTFQ14527 1009 aaKnown RBP eCLIP11.18□□□□□ -0.622e-9■□□□□ 9
SF3B2-201ENST00000322535 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 TMEM154Q6P9G4 183 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 SMC1BQ8NDV3 1235 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 CEP295NLQ96MC4 621 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 HAUS4Q9H6D7 363 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 DLGAP2Q9P1A6 1054 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 ADD3Q9UEY8 706 aaKnown RBP11.18□□□□□ -0.62
SF3B2-201ENST00000322535 MYH8P13535 1937 aa11.18□□□□□ -0.62
SF3B2-201ENST00000322535 CCT8L1PA6NM43 557 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 PSMC1P62191 440 aaKnown RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 CCDC38Q502W7 563 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 CEP128Q6ZU80 1094 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 CLEC10AQ8IUN9 316 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 MLKLQ8NB16 471 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 ANKK1Q8NFD2 765 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 CHMP2BQ9UQN3 213 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 GCOM1H8Y6P7 765 aaPredicted RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 NCK2O43639 380 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 KRT86O43790 486 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 GLI1P08151 1106 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 MYZAPP0CAP1 466 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 HERVK_113P62684 666 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 ITGA7Q13683 1181 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 MIGA2Q7L4E1 593 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 SLC7A5P1Q8MH63 180 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 IQCKQ8N0W5 287 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 ARFGAP2Q8N6H7 521 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 CCHCR1Q8TD31 782 aa11.17□□□□□ -0.62
SF3B2-201ENST00000322535 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 ANGEL1Q9UNK9 670 aaKnown RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
SF3B2-201ENST00000322535 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 HMGB1P1B2RPK0 211 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 RAD21O60216 631 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 GNAT2P19087 354 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 EIF6P56537 245 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 GRIN1Q05586 938 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 NFIAQ12857 509 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 GLE1Q53GS7 698 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 LACTB2Q53H82 288 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 HAUS3Q68CZ6 603 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 PPP4R3AQ6IN85 833 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 WDR75Q8IWA0 830 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 ZFPM1Q8IX07 1006 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms