RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 SRRM3A6NNA2 597 aaPredicted RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 CASQ2O14958 399 aaPredicted RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 PRPF3O43395 683 aaKnown RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 MGRN1O60291 552 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 TRPA1O75762 1119 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 GFPT2O94808 682 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 ECEL1O95672 775 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 CACNA2D1P54289 1103 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 ARL6IP4Q66PJ3 421 aaKnown RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 RPGRQ92834 1020 aaKnown RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 CARD9Q9H257 536 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 RABGAP1Q9Y3P9 1069 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 SPATA31A3Q5VYP0 1347 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 I3L4J1 428 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 STAMBPO95630 424 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 GSTA2P09210 222 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 DRD4P21917 467 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 HSPA1LP34931 641 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 ATP2C1P98194 919 aaPredicted RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 CD302Q8IX05 232 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 FAM161BQ96MY7 647 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 GORASP1Q9BQQ3 440 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 TMEM60Q9H2L4 133 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 TYW1Q9NV66 732 aaKnown RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 XDHP47989 1333 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 PHKA1P46020 1223 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 GRAMD1BQ3KR37 738 aa17.91■□□□□ 0.46
PACS1-201ENST00000320580 EPM2AIP1Q7L775 607 aaPredicted RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 MYLK4Q86YV6 388 aaPredicted RBP17.91■□□□□ 0.46
PACS1-201ENST00000320580 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 SSU72P8A0A1W2PR75 194 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 SPARCL1Q14515 664 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 HIPK4Q8NE63 616 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 CCDC110Q8TBZ0 833 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 SLIT1O75093 1534 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 MAGEA13PA6NCF6 341 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 KLHDC7AQ5VTJ3 777 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 MAB21L3Q8N8X9 362 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 LPIN2Q92539 896 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
PACS1-201ENST00000320580 ANKS1AQ92625 1134 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 NOL3O60936 208 aaKnown RBP17.9■□□□□ 0.46
PACS1-201ENST00000320580 PYGLP06737 847 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 USP4Q13107 963 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 TRADDQ15628 312 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 PDP2Q9P2J9 529 aa17.9■□□□□ 0.46
PACS1-201ENST00000320580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
PACS1-201ENST00000320580 PALLDQ8WX93 1383 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 HAUS5O94927 633 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 PLCG2P16885 1265 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 IRX4P78413 519 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 BLMHQ13867 455 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 RCN1Q15293 331 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 MIER3Q7Z3K6 550 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 Q9H521 79 aa17.89■□□□□ 0.46
PACS1-201ENST00000320580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.89■□□□□ 0.461e-6■■■■■ 77.8
PACS1-201ENST00000320580 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 PODXLO00592 558 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
PACS1-201ENST00000320580 SLC18A3Q16572 532 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 KCTD19Q17RG1 926 aaPredicted RBP17.89■□□□□ 0.45
PACS1-201ENST00000320580 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
PACS1-201ENST00000320580 ERMNQ8TAM6 284 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 DCAF5Q96JK2 942 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
PACS1-201ENST00000320580 EXOC1LA0A1B0GW35 172 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 FAM200BP0CF97 657 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 MARK3P27448 753 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 NAB2Q15742 525 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 KIAA1755Q5JYT7 1200 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 GRAMD4Q6IC98 578 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 WDR59Q6PJI9 974 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 STXBP4Q6ZWJ1 553 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 RIC8AQ9NPQ8 531 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 SEC31BQ9NQW1 1179 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 USP40Q9NVE5 1235 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 IFT172Q9UG01 1749 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 COPB2P35606 906 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 STK4Q13043 487 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 MKRN3Q13064 507 aaKnown RBP17.89■□□□□ 0.45
PACS1-201ENST00000320580 PLS1Q14651 629 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 LRRC36Q1X8D7 754 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 IGDCC4Q8TDY8 1250 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 TUBB6Q9BUF5 446 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 NDE1Q9NXR1 346 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 ANAPC5Q9UJX4 755 aa17.89■□□□□ 0.45
PACS1-201ENST00000320580 F8VZ95 297 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 ATP9AO75110 1047 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 SPAG7O75391 227 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 NR2F2P24468 414 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 DDB1Q16531 1140 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 TTLL11Q8NHH1 800 aa17.88■□□□□ 0.45
PACS1-201ENST00000320580 EPS8L3Q8TE67 593 aaKnown RBP17.88■□□□□ 0.45
PACS1-201ENST00000320580 CCT6BQ92526 530 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms