RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 ZNF214Q9UL59 606 aaPredicted RBP20.1■□□□□ 0.81
SHISA3-201ENST00000319234 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
SHISA3-201ENST00000319234 RLFQ13129 1914 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 TRAF5O00463 557 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 RHOXF2BP0C7M4 288 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 GAP43P17677 238 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 MTMR1Q13613 665 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
SHISA3-201ENST00000319234 ARHGEF16Q5VV41 709 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 XRRA1Q6P2D8 792 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 EPM2AIP1Q7L775 607 aaPredicted RBP20.09■□□□□ 0.81
SHISA3-201ENST00000319234 MIER3Q7Z3K6 550 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 PCMTD1Q96MG8 357 aaPredicted RBP20.09■□□□□ 0.81
SHISA3-201ENST00000319234 RHOXF2Q9BQY4 288 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 ABCB6Q9NP58 842 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 PSD3Q9NYI0 1048 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 CALCOCO1Q9P1Z2 691 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 MYPNQ86TC9 1320 aa20.09■□□□□ 0.81
SHISA3-201ENST00000319234 DDX39AO00148 427 aaKnown RBP20.08■□□□□ 0.81
SHISA3-201ENST00000319234 NKRFO15226 690 aaKnown RBP eCLIP20.08■□□□□ 0.81
SHISA3-201ENST00000319234 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
SHISA3-201ENST00000319234 VAV2P52735 878 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 VSNL1P62760 191 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 VGLL4Q14135 290 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 TMEM132BQ14DG7 1078 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 C9orf131Q5VYM1 1079 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 LXNQ9BS40 222 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 NDST4Q9H3R1 872 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 PKD2L1Q9P0L9 805 aa20.08■□□□□ 0.81
SHISA3-201ENST00000319234 WRAP73Q9P2S5 460 aaPredicted RBP20.08■□□□□ 0.81
SHISA3-201ENST00000319234 RSPH10B2B2RC85 870 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 GNA14O95837 355 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 RSPH10BP0C881 870 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 YBX3P16989 372 aaKnown RBP eCLIP20.08■□□□□ 0.8
SHISA3-201ENST00000319234 ITGB3BPQ13352 177 aaPredicted RBP20.08■□□□□ 0.8
SHISA3-201ENST00000319234 EDRF1Q3B7T1 1238 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 ZC3H3Q8IXZ2 948 aaKnown RBP20.08■□□□□ 0.8
SHISA3-201ENST00000319234 NOA1Q8NC60 698 aaKnown RBP20.08■□□□□ 0.8
SHISA3-201ENST00000319234 EXOC4Q96A65 974 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 MAF1Q9H063 256 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 ACBD3Q9H3P7 528 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 KCND2Q9NZV8 630 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 PLAGL2Q9UPG8 496 aa20.08■□□□□ 0.8
SHISA3-201ENST00000319234 POLR2AP24928 1970 aaKnown RBP20.08■□□□□ 0.8
SHISA3-201ENST00000319234 TARSL2A2RTX5 802 aaKnown RBP20.07■□□□□ 0.8
SHISA3-201ENST00000319234 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
SHISA3-201ENST00000319234 ZBTB39O15060 712 aa20.07■□□□□ 0.8
SHISA3-201ENST00000319234 PPP1R12BO60237 982 aaPredicted RBP20.07■□□□□ 0.8
SHISA3-201ENST00000319234 CASP5P51878 434 aa20.07■□□□□ 0.8
SHISA3-201ENST00000319234 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
SHISA3-201ENST00000319234 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
SHISA3-201ENST00000319234 FAM13AO94988 1023 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 ATP1A1P05023 1023 aaKnown RBP20.06■□□□□ 0.8
SHISA3-201ENST00000319234 P4HBP07237 508 aaKnown RBP20.06■□□□□ 0.8
SHISA3-201ENST00000319234 KLK7P49862 253 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 KIF5AQ12840 1032 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 SPA17Q15506 151 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 BMT2Q1RMZ1 405 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 BANK1Q8NDB2 785 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 EDEM3Q9BZQ6 932 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 OLFML3Q9NRN5 406 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 SIK3Q9Y2K2 1263 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 CSADQ9Y600 493 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 TFRCP02786 760 aaKnown RBP20.06■□□□□ 0.8
SHISA3-201ENST00000319234 CCND2P30279 289 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 KNOP1Q1ED39 458 aaKnown RBP20.06■□□□□ 0.8
SHISA3-201ENST00000319234 CCDC40Q4G0X9 1142 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 IQCEQ6IPM2 695 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 CCDC42Q96M95 316 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 TRAF3IP3Q9Y228 551 aa20.06■□□□□ 0.8
SHISA3-201ENST00000319234 H3BQF6 201 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 USO1O60763 962 aaKnown RBP20.05■□□□□ 0.8
SHISA3-201ENST00000319234 MYBP10242 640 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 MARSP56192 900 aaKnown RBP20.05■□□□□ 0.8
SHISA3-201ENST00000319234 MAP9Q49MG5 647 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 VSIG10LQ86VR7 867 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 ACAD9Q9H845 621 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 VIPAS39Q9H9C1 493 aa20.05■□□□□ 0.8
SHISA3-201ENST00000319234 ERICH4A6NGS2 130 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 LCA5LO95447 670 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 HOXD13P35453 343 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 ADAM9Q13443 819 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 CASP8Q14790 479 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 MYCT1Q8N699 235 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 SECISBP2LQ93073 1101 aaKnown RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 LACRTQ9GZZ8 138 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 PDE11AQ9HCR9 933 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 ZCCHC17Q9NP64 241 aaKnown RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 ODF2LQ9ULJ1 636 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 COL11A1P12107 1806 aaPredicted RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 ARHGEF35A5YM69 484 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 PDXKO00764 312 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 ENC1O14682 589 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 CETN3O15182 167 aa20.04■□□□□ 0.8
SHISA3-201ENST00000319234 CALUO43852 315 aaPredicted RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 PRPF6O94906 941 aaKnown RBP20.04■□□□□ 0.8
SHISA3-201ENST00000319234 NR3C2P08235 984 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms