RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TRAPPC10P48553 1259 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 ARL4CP56559 192 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 NR5A1Q13285 461 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 TAF1BQ53T94 588 aaPredicted RBP15.9■□□□□ 0.14
SCN3B-201ENST00000299333 SARM1Q6SZW1 724 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 KLC2Q9H0B6 622 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 KIF17Q9P2E2 1029 aa15.9■□□□□ 0.14
SCN3B-201ENST00000299333 TOM1O60784 492 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 TAC1P20366 129 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 SOX5P35711 763 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 HDDC2Q7Z4H3 204 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 LONP2Q86WA8 852 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 BBS5Q8N3I7 341 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 USP44Q9H0E7 712 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 BATF3Q9NR55 127 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 ABHD10Q9NUJ1 306 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 HDAC6Q9UBN7 1215 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF518AQ6AHZ1 1483 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 DEAF1O75398 565 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-201ENST00000299333 SERPINB2P05120 415 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 PRKG1Q13976 671 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 HOOK2Q96ED9 719 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 MRPL40Q9NQ50 206 aaKnown RBP15.89■□□□□ 0.13
SCN3B-201ENST00000299333 NCK2O43639 380 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 KCNA3P22001 575 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 CYP2C19P33261 490 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 NR1H3Q13133 447 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 LRRC36Q1X8D7 754 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 SPOUT1Q5T280 376 aaKnown RBP15.89■□□□□ 0.13
SCN3B-201ENST00000299333 NFRKBQ6P4R8 1299 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 ARHGEF25Q86VW2 580 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 ATP6V0A1Q93050 837 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 TRIM33Q9UPN9 1127 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 NEURL1BA8MQ27 555 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 MAP4P27816 1152 aaKnown RBP15.89■□□□□ 0.13
SCN3B-201ENST00000299333 RABGAP1LQ5R372 815 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 HSPH1Q92598 858 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 HEMGNQ9BXL5 484 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 POLE3Q9NRF9 147 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 UHRF1BP1LA0JNW5 1464 aa15.89■□□□□ 0.13
SCN3B-201ENST00000299333 GAP43P17677 238 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 KLC1Q07866 573 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 OR9Q1Q8NGQ5 310 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 MEIS1O00470 390 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 TLR3O15455 904 aaKnown RBP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 AP1B1Q10567 949 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 OR6B2Q6IFH4 312 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 PDXDC1Q6P996 788 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 BTNL9Q6UXG8 535 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 ACCSQ96QU6 501 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 VPS11Q9H270 941 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 EMILIN3Q9NT22 766 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 TEX14Q8IWB6 1497 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 CASP10Q92851 521 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 FAM96AQ9H5X1 160 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 TBC1D23Q9NUY8 699 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 USP40Q9NVE5 1235 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 KRT38O76015 456 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 LARGE1O95461 756 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 CYP21A2P08686 494 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 FOSL2P15408 326 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 RESTQ13127 1097 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 ALKBH8Q96BT7 664 aaKnown RBP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 ZBTB10Q96DT7 871 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 NDEL1Q9GZM8 345 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 DIS3Q9Y2L1 958 aaKnown RBP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 MRPL11Q9Y3B7 192 aaKnown RBP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 PGM1P36871 562 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 EFTUD2Q15029 972 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 ZC3H15Q8WU90 426 aaKnown RBP15.88■□□□□ 0.13
SCN3B-201ENST00000299333 ANKRD36BP1Q96IX9 119 aa15.88■□□□□ 0.13
SCN3B-201ENST00000299333 MMP1P03956 469 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 VCAM1P19320 739 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 APOL6Q9BWW8 343 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 TRPM2O94759 1503 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 CD58P19256 250 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 PMLP29590 882 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 SERPINB10P48595 397 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 USP14P54578 494 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 COPS2P61201 443 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ARL8AQ96BM9 186 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 OSBPL9Q96SU4 736 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 CCPG1Q9ULG6 757 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 KPNA7A9QM74 516 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 SERPINB3P29508 390 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 CNGA3Q16281 694 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 EP400NLQ6ZTU2 488 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 RHOT2Q8IXI1 618 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 CARD9Q9H257 536 aa15.87■□□□□ 0.13
SCN3B-201ENST00000299333 GEMIN8Q9NWZ8 242 aaKnown RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 TTC7AQ9ULT0 858 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-201ENST00000299333 ARHGAP26Q9UNA1 814 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms