RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 PLS1Q14651 629 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 UTP14CQ5TAP6 766 aaKnown RBP25.48■■□□□ 1.67
RAB40B-201ENST00000269347 VSIG10LQ86VR7 867 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 BORCS6Q96GS4 357 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 STRA6Q9BX79 667 aa25.48■■□□□ 1.67
RAB40B-201ENST00000269347 MAP3K20Q9NYL2 800 aaKnown RBP25.48■■□□□ 1.67
RAB40B-201ENST00000269347 LOC285556D6RIA3 1793 aa25.47■■□□□ 1.67
RAB40B-201ENST00000269347 KIF20AO95235 890 aa25.47■■□□□ 1.67
RAB40B-201ENST00000269347 EIF4A3P38919 411 aaKnown RBP25.47■■□□□ 1.67
RAB40B-201ENST00000269347 NEK11Q8NG66 645 aa25.47■■□□□ 1.67
RAB40B-201ENST00000269347 CCDC94Q9BW85 323 aaPredicted RBP25.47■■□□□ 1.67
RAB40B-201ENST00000269347 GPRC5CQ9NQ84 441 aa25.47■■□□□ 1.67
RAB40B-201ENST00000269347 AJAP1Q9UKB5 411 aaPredicted RBP25.47■■□□□ 1.67
RAB40B-201ENST00000269347 ARHGEF35A5YM69 484 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 GNA14O95837 355 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 GUCY2CP25092 1073 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 POLR2FP61218 127 aaKnown RBP25.46■■□□□ 1.67
RAB40B-201ENST00000269347 TSR1Q2NL82 804 aaKnown RBP25.46■■□□□ 1.67
RAB40B-201ENST00000269347 ODR4Q5SWX8 454 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 PLA2G4FQ68DD2 849 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 GANQ9H2C0 597 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 CYP39A1Q9NYL5 469 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 RNF181Q9P0P0 153 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 PCDHB13Q9Y5F0 798 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 EIF3CLB5ME19 914 aaKnown RBP25.46■■□□□ 1.67
RAB40B-201ENST00000269347 BACH1O14867 736 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 PPP1R37O75864 691 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 NPEPPSP55786 919 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 CDK17Q00537 523 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 EIF3CQ99613 913 aaKnown RBP25.46■■□□□ 1.67
RAB40B-201ENST00000269347 ZSWIM4Q9H7M6 989 aa25.46■■□□□ 1.67
RAB40B-201ENST00000269347 FBXO38Q6PIJ6 1188 aa25.45■■□□□ 1.67
RAB40B-201ENST00000269347 FAM178BQ8IXR5 827 aa25.45■■□□□ 1.67
RAB40B-201ENST00000269347 SLC35C1Q96A29 364 aa25.45■■□□□ 1.67
RAB40B-201ENST00000269347 PPP2R3BQ9Y5P8 575 aa25.45■■□□□ 1.67
RAB40B-201ENST00000269347 MYH10P35580 1976 aa25.45■■□□□ 1.66
RAB40B-201ENST00000269347 CALUO43852 315 aaPredicted RBP25.45■■□□□ 1.66
RAB40B-201ENST00000269347 QARSP47897 775 aaKnown RBP25.45■■□□□ 1.66
RAB40B-201ENST00000269347 ASTE1Q2TB18 679 aaPredicted RBP25.45■■□□□ 1.66
RAB40B-201ENST00000269347 FRMD5Q7Z6J6 570 aa25.45■■□□□ 1.66
RAB40B-201ENST00000269347 ZSWIM2Q8NEG5 633 aa25.45■■□□□ 1.66
RAB40B-201ENST00000269347 ZNF397Q8NF99 534 aaPredicted RBP25.45■■□□□ 1.66
RAB40B-201ENST00000269347 SPON1Q9HCB6 807 aa25.45■■□□□ 1.66
RAB40B-201ENST00000269347 ARMCX3Q9UH62 379 aaPredicted RBP25.45■■□□□ 1.66
RAB40B-201ENST00000269347 PCNTO95613 3336 aa25.45■■□□□ 1.66
RAB40B-201ENST00000269347 EIF3DO15371 548 aaKnown RBP eCLIP25.44■■□□□ 1.66
RAB40B-201ENST00000269347 USO1O60763 962 aaKnown RBP25.44■■□□□ 1.66
RAB40B-201ENST00000269347 DCAF17Q5H9S7 520 aaPredicted RBP25.44■■□□□ 1.66
RAB40B-201ENST00000269347 CLMNQ96JQ2 1002 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 ZNHIT6Q9NWK9 470 aaKnown RBP25.44■■□□□ 1.66
RAB40B-201ENST00000269347 ODF2LQ9ULJ1 636 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 ENC1O14682 589 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 YWHABP31946 246 aaKnown RBP25.44■■□□□ 1.66
RAB40B-201ENST00000269347 PPP2R3AQ06190 1150 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 CCDC122Q5T0U0 273 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 TBC1D22BQ9NU19 505 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 HDAC6Q9UBN7 1215 aa25.44■■□□□ 1.66
RAB40B-201ENST00000269347 FDX1P10109 184 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 KCNA2P16389 499 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 KIF11P52732 1056 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 SOX10P56693 466 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 SUPT20HL1Q3ZLR7 823 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 SH3D19Q5HYK7 790 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 CCDC170Q8IYT3 715 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 NEK9Q8TD19 979 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 INPP4AQ96PE3 977 aaPredicted RBP25.43■■□□□ 1.66
RAB40B-201ENST00000269347 TMOD4Q9NZQ9 345 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 BTBD7Q9P203 1132 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 CEP72Q9P209 647 aa25.43■■□□□ 1.66
RAB40B-201ENST00000269347 ATP2A1O14983 1001 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 CYLC1P35663 651 aaPredicted RBP25.42■■□□□ 1.66
RAB40B-201ENST00000269347 OAZ1P54368 228 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 CNTN2Q02246 1040 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 GFPT1Q06210 699 aaPredicted RBP25.42■■□□□ 1.66
RAB40B-201ENST00000269347 SAMD3Q8N6K7 520 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 JAKMIP2Q96AA8 810 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 CCDC42Q96M95 316 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 TEX13BQ9BXU2 312 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 AGPAT3Q9NRZ7 376 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 ZNF862O60290 1169 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 AMPD2Q01433 879 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 GJB7Q6PEY0 223 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 ANO5Q75V66 913 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 CACNA2D4Q7Z3S7 1137 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 SIX2Q9NPC8 291 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 ADARB2Q9NS39 739 aaKnown RBP25.42■■□□□ 1.66
RAB40B-201ENST00000269347 SALL4Q9UJQ4 1053 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 FAM184BQ9ULE4 1060 aa25.42■■□□□ 1.66
RAB40B-201ENST00000269347 PON1P27169 355 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 SP2Q02086 613 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 HAUS4Q9H6D7 363 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 DMAC2Q9NW81 257 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 KCND2Q9NZV8 630 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 DBR1Q9UK59 544 aaKnown RBP25.41■■□□□ 1.66
RAB40B-201ENST00000269347 STBD1O95210 358 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 LYPLA2O95372 231 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 AFPP02771 609 aaKnown RBP25.41■■□□□ 1.66
RAB40B-201ENST00000269347 CCND2P30279 289 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 CYP2J2P51589 502 aa25.41■■□□□ 1.66
RAB40B-201ENST00000269347 SP4Q02446 784 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms