RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 KBTBD4Q9NVX7 518 aa12.39□□□□□ -0.43
CTSC-201ENST00000227266 ZEB2O60315 1214 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 RARRES1P49788 294 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 AMPD3Q01432 767 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 RAD51AP2Q09MP3 1159 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 MTERF2Q49AM1 385 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 SH3RF1Q7Z6J0 888 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 RNF180Q86T96 592 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
CTSC-201ENST00000227266 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 DEFB118Q96PH6 123 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 RNPEPQ9H4A4 650 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
CTSC-201ENST00000227266 ANKEF1Q9NU02 776 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 DBR1Q9UK59 544 aaKnown RBP12.38□□□□□ -0.43
CTSC-201ENST00000227266 BRCA2P51587 3418 aa12.38□□□□□ -0.43
CTSC-201ENST00000227266 MYMKA6NI61 221 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 KRT18P05783 430 aaKnown RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 CLCN1P35523 988 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 PURAQ00577 322 aaKnown RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 CUL4BQ13620 913 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 KCNA10Q16322 511 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 DYMQ7RTS9 669 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 PPP1R13LQ8WUF5 828 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 ANP32BQ92688 251 aaKnown RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 KAT2BQ92831 832 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 ZNF333Q96JL9 665 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 RUSC1Q9BVN2 902 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 PAK6Q9NQU5 681 aaPredicted RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 NPHP3-ACAD11A0A0J9YXS1 232 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 KPNA6O60684 536 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 USO1O60763 962 aaKnown RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 F2P00734 622 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 CYP11B2P19099 503 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 ZNF445P59923 1031 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 NKX3-2P78367 333 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
CTSC-201ENST00000227266 MFSD10Q14728 455 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 LRRC41Q15345 812 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 KIAA0753Q2KHM9 967 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 RINT1Q6NUQ1 792 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 GAS2L3Q86XJ1 694 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 KLHDC9Q8NEP7 349 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 DDX12PQ92771 950 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 POLD4Q9HCU8 107 aa12.37□□□□□ -0.43
CTSC-201ENST00000227266 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 HBP1O60381 514 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 ASGR1P07306 291 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 IGBP1P78318 339 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 ASIC1P78348 528 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 ARSHQ5FYA8 562 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 ELOA2Q8IYF1 753 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 ARMC5Q96C12 935 aa12.36□□□□□ -0.43
CTSC-201ENST00000227266 TRIM44Q96DX7 344 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 MTG1Q9BT17 334 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 NIFKQ9BYG3 293 aaKnown RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 RRAGDQ9NQL2 400 aaPredicted RBP12.36□□□□□ -0.43
CTSC-201ENST00000227266 SMC2O95347 1197 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 INSRRP14616 1297 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 IDEP14735 1019 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 PSEN2P49810 448 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 DPYDQ12882 1025 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 CCSAPQ6IQ19 270 aaPredicted RBP12.35□□□□□ -0.43
CTSC-201ENST00000227266 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 UBE2Q2Q8WVN8 375 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 TRAPPC12Q8WVT3 735 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 C7orf25Q9BPX7 421 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 KATNAL1Q9BW62 490 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 ZHX3Q9H4I2 956 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 MYL1P05976 194 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 POLGP54098 1239 aaPredicted RBP12.35□□□□□ -0.43
CTSC-201ENST00000227266 PPFIA1Q13136 1202 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 LRSAM1Q6UWE0 723 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
CTSC-201ENST00000227266 ZBTB42B2RXF5 422 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 BIN1O00499 593 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 TBCAO75347 108 aaKnown RBP12.34□□□□□ -0.43
CTSC-201ENST00000227266 DGAT1O75907 488 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 SMIM10L2AP0DMW4 78 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 SMIM10L2BP0DMW5 78 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 ACLYP53396 1101 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 TBC1D8BQ0IIM8 1120 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms