RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 KLHL8Q9P2G9 620 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 SFMBT1Q9UHJ3 866 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 GABPB1Q06547 395 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 CAPRIN1Q14444 709 aaKnown RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 RHPN2Q8IUC4 686 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 ZBTB18Q99592 522 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 EFHD1Q9BUP0 239 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 PDE11AQ9HCR9 933 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 SCHIP1Q9P0W5 487 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 EXOC1LA0A1B0GW35 172 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 APBA1Q02410 837 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 ZNF699Q32M78 642 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 FOXP4Q8IVH2 680 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 EDEM3Q9BZQ6 932 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 THAP9Q9H5L6 903 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 DNAJC17Q9NVM6 304 aaKnown RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 KDM5CP41229 1560 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 ZBTB7AO95365 584 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 PAPOLAP51003 745 aaKnown RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 TAF1BQ53T94 588 aaPredicted RBP14.21□□□□□ -0.13
COL1A1-201ENST00000225964 PYROXD1Q8WU10 500 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 AP1M1Q9BXS5 423 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 TEKT2Q9UIF3 430 aa14.21□□□□□ -0.13
COL1A1-201ENST00000225964 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
COL1A1-201ENST00000225964 ASNSP08243 561 aa14.21□□□□□ -0.14
COL1A1-201ENST00000225964 SNCBQ16143 134 aa14.21□□□□□ -0.14
COL1A1-201ENST00000225964 SPATS2Q86XZ4 545 aaKnown RBP14.21□□□□□ -0.14
COL1A1-201ENST00000225964 RMDN3Q96TC7 470 aa14.21□□□□□ -0.14
COL1A1-201ENST00000225964 DRC3Q9H069 523 aa14.21□□□□□ -0.14
COL1A1-201ENST00000225964 UGGT1Q9NYU2 1555 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 EIF4A3P38919 411 aaKnown RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 GIPC2Q8TF65 315 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 BSDC1Q9NW68 430 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 ZSWIM5Q9P217 1185 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 KIF1BO60333 1816 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 CLDN3O15551 220 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 ANP32DO95626 131 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 TRIM15Q9C019 465 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 LRRC31Q6UY01 552 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 MAP4K1Q92918 833 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 BCL2L12Q9HB09 334 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 PIH1D3Q9NQM4 214 aaKnown RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 IQANK1A0A1B0GTG1 560 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 DNAJC8O75937 253 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 PRELPP51888 382 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 TDRD3Q9H7E2 651 aaKnown RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 TOPORSQ9NS56 1045 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
COL1A1-201ENST00000225964 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 SYNE4Q8N205 404 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 ACRBPQ8NEB7 543 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 FAM167AQ96KS9 214 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 SPTLC3Q9NUV7 552 aa14.2□□□□□ -0.14
COL1A1-201ENST00000225964 PI4K2BG5E9Z4 385 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PTK2BQ14289 1009 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 LZICQ8WZA0 190 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 ZNF668Q96K58 619 aaPredicted RBP14.19□□□□□ -0.14
COL1A1-201ENST00000225964 AFF4Q9UHB7 1163 aaKnown RBP14.19□□□□□ -0.14
COL1A1-201ENST00000225964 MID2Q9UJV3 735 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 HEG1Q9ULI3 1381 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 MYL1P05976 194 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 CYP21A2P08686 494 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 ATICP31939 592 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 LIG3P49916 1009 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 MAPK6Q16659 721 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 FAM133BQ5BKY9 247 aaKnown RBP14.19□□□□□ -0.14
COL1A1-201ENST00000225964 CEP19Q96LK0 163 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 NEUROG2Q9H2A3 272 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 SCINQ9Y6U3 715 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 SOWAHDA6NJG2 315 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 HSPA4LO95757 839 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 CDC25BP30305 580 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 CENPUQ71F23 418 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
COL1A1-201ENST00000225964 KLC2Q9H0B6 622 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 INTUQ9ULD6 942 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 A0A1W2PQ27 194 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 A0A1W2PQ64 194 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 A0A1W2PQD8 194 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 HSPA6P17066 643 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 DR1Q01658 176 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 CYP27A1Q02318 531 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 GPT2Q8TD30 523 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PBXIP1Q96AQ6 731 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PAGE5Q96GU1 130 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PCDHB6Q9Y5E3 794 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 E5RI56 91 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 TJP3O95049 919 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 PLEKHA8P1O95397 391 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 EPHB4P54760 987 aa14.19□□□□□ -0.14
COL1A1-201ENST00000225964 NME3Q13232 169 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms