RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 KCNV1Q6PIU1 500 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 CCDC60Q8IWA6 550 aaPredicted RBP20.04■□□□□ 0.8
VIM-201ENST00000224237 FAM178BQ8IXR5 827 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 ZNF507Q8TCN5 953 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 MORC4Q8TE76 937 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 CEP63Q96MT8 703 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 PLXNB2O15031 1838 aa20.04■□□□□ 0.8
VIM-201ENST00000224237 BACH1O14867 736 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 USO1O60763 962 aaKnown RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 ATG7O95352 703 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 CCZ1BP86790 482 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 CCZ1P86791 482 aaPredicted RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 UBXN1Q04323 297 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 XKR9Q5GH70 373 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 ODR4Q5SWX8 454 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 UTP14CQ5TAP6 766 aaKnown RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 ABRAQ8N0Z2 381 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 LARSQ9P2J5 1176 aaKnown RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 TRAF3IP3Q9Y228 551 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 MCM3APO60318 1980 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 IGSF9BQ9UPX0 1349 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 ASB14A6NK59 587 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 PDXKO00764 312 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 STRNO43815 780 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 SKILP12757 684 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 MAPK7Q13164 816 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 FAM110CQ1W6H9 321 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 ANO5Q75V66 913 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 ZC3H3Q8IXZ2 948 aaKnown RBP20.03■□□□□ 0.8
VIM-201ENST00000224237 DAW1Q8N136 415 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 FIZ1Q96SL8 496 aa20.03■□□□□ 0.8
VIM-201ENST00000224237 ZNF862O60290 1169 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 PRPF6O94906 941 aaKnown RBP20.02■□□□□ 0.8
VIM-201ENST00000224237 GNA14O95837 355 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 DNM2P50570 870 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 CCDC112Q8NEF3 446 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 DRC1Q96MC2 740 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 NOC4LQ9BVI4 516 aaKnown RBP20.02■□□□□ 0.8
VIM-201ENST00000224237 TYW1Q9NV66 732 aaKnown RBP20.02■□□□□ 0.8
VIM-201ENST00000224237 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.02■□□□□ 0.88e-10■□□□□ 9.4
VIM-201ENST00000224237 IVNS1ABPQ9Y6Y0 642 aa20.02■□□□□ 0.8
VIM-201ENST00000224237 SYNGAP1Q96PV0 1343 aa20.02■□□□□ 0.79
VIM-201ENST00000224237 A0A1W2PQC6 194 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 TMEM150BA6NC51 233 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 PES1O00541 588 aaKnown RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 CALUO43852 315 aaPredicted RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 PRKCEQ02156 737 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 PLA2G4FQ68DD2 849 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 METTL7BQ6UX53 244 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 ZNF720Q7Z2F6 126 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 TRMT1LQ7Z2T5 733 aaKnown RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 MANSC4A6NHS7 340 aaPredicted RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 ECM2O94769 699 aaPredicted RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 SLC10A3P09131 477 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 ADORA2AP29274 412 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 NMT1P30419 496 aaKnown RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 HOXD13P35453 343 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 TRIM14Q14142 442 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 PPFIBP1Q86W92 1011 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 ZNF302Q9NR11 478 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 PCDHB13Q9Y5F0 798 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 MAFBQ9Y5Q3 323 aaPredicted RBP20.01■□□□□ 0.79
VIM-201ENST00000224237 TLL2Q9Y6L7 1015 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 ARID2Q68CP9 1835 aa20.01■□□□□ 0.79
VIM-201ENST00000224237 MYH9P35579 1960 aaKnown RBP20■□□□□ 0.79
VIM-201ENST00000224237 PLXNA1Q9UIW2 1896 aa20■□□□□ 0.79
VIM-201ENST00000224237 STBD1O95210 358 aa20■□□□□ 0.79
VIM-201ENST00000224237 NPEPPSP55786 919 aa20■□□□□ 0.79
VIM-201ENST00000224237 MAN2A1Q16706 1144 aa20■□□□□ 0.79
VIM-201ENST00000224237 ZNF792Q3KQV3 632 aa20■□□□□ 0.79
VIM-201ENST00000224237 XKR3Q5GH77 459 aa20■□□□□ 0.79
VIM-201ENST00000224237 MAEAQ7L5Y9 396 aa20■□□□□ 0.79
VIM-201ENST00000224237 CEP170P1Q96L14 293 aa20■□□□□ 0.79
VIM-201ENST00000224237 SH2D3AQ9BRG2 576 aa20■□□□□ 0.79
VIM-201ENST00000224237 CPA4Q9UI42 421 aa20■□□□□ 0.79
VIM-201ENST00000224237 DDX41Q9UJV9 622 aaKnown RBP20■□□□□ 0.79
VIM-201ENST00000224237 IGKV6D-21A0A0A0MT36 114 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 CETN3O15182 167 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 GGPS1O95749 300 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 TPM1P09493 284 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 PLS3P13797 630 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 NR2F2P24468 414 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 MARSP56192 900 aaKnown RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 ADAM9Q13443 819 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 ALCAMQ13740 583 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 MIIPQ5JXC2 388 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 FBXO16Q8IX29 292 aaPredicted RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 MLXIPQ9HAP2 919 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 SEPT9Q9UHD8 586 aaPredicted RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 ABT1Q9ULW3 272 aaKnown RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 FAM155AB1AL88 458 aaPredicted RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 AKR1B15C9JRZ8 316 aaPredicted RBP19.99■□□□□ 0.79
VIM-201ENST00000224237 MAPK4P31152 587 aa19.99■□□□□ 0.79
VIM-201ENST00000224237 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
VIM-201ENST00000224237 LY6KQ17RY6 165 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms