RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 XRCC6P12956 609 aaKnown RBP eCLIP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 YWHABP31946 246 aaKnown RBP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 ZNF200P98182 395 aaPredicted RBP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 FAAP100Q0VG06 881 aa26.42■■□□□ 1.82
HOMER3-201ENST00000221222 TARBP2Q15633 366 aaKnown RBP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 HYIQ5T013 277 aa26.42■■□□□ 1.82
HOMER3-201ENST00000221222 TRMT1LQ7Z2T5 733 aaKnown RBP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 SPATA32Q96LK8 384 aa26.42■■□□□ 1.82
HOMER3-201ENST00000221222 SEPT9Q9UHD8 586 aaPredicted RBP26.42■■□□□ 1.82
HOMER3-201ENST00000221222 KDM3AQ9Y4C1 1321 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 DDX11L8A8MPP1 907 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 CUTAO60888 179 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 UBA7P41226 1012 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 ECM1Q16610 540 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 OTUD6AQ7L8S5 288 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 ZNF579Q8NAF0 562 aaKnown RBP26.41■■□□□ 1.82
HOMER3-201ENST00000221222 TUBE1Q9UJT0 475 aa26.41■■□□□ 1.82
HOMER3-201ENST00000221222 LAMA3Q16787 3333 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 TREHO43280 583 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 CLTBP09497 229 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 AXDND1Q5T1B0 1012 aaPredicted RBP26.4■■□□□ 1.82
HOMER3-201ENST00000221222 POTEGQ6S5H5 508 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 CABP7Q86V35 215 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 SERINC5Q86VE9 423 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 KCTD17Q8N5Z5 321 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 TRAPPC12Q8WVT3 735 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 NACC1Q96RE7 527 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 CEP89Q96ST8 783 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 CCSER1Q9C0I3 900 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 ANKEF1Q9NU02 776 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 PCDHA7Q9UN72 937 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 NOD1Q9Y239 953 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 PPME1Q9Y570 386 aa26.4■■□□□ 1.82
HOMER3-201ENST00000221222 TMEM150BA6NC51 233 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 IGBP1P78318 339 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 PTK7Q13308 1070 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 TDHQ8IZJ6 230 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 NT5C3AQ9H0P0 336 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 PDLIM7Q9NR12 457 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 CYP26B1Q9NR63 512 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 TBX21Q9UL17 535 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 KIAA1024Q9UPX6 916 aa26.39■■□□□ 1.82
HOMER3-201ENST00000221222 ZBTB39O15060 712 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 C22orf31O95567 290 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 ME1P48163 572 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 PLA2G4FQ68DD2 849 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 MTHFD1LQ6UB35 978 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 SYMPKQ92797 1274 aaKnown RBP26.38■■□□□ 1.81
HOMER3-201ENST00000221222 EPSTI1Q96J88 318 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 PNMA5Q96PV4 448 aa26.38■■□□□ 1.81
HOMER3-201ENST00000221222 DDX19AQ9NUU7 478 aaKnown RBP26.38■■□□□ 1.81
HOMER3-201ENST00000221222 DBR1Q9UK59 544 aaKnown RBP26.38■■□□□ 1.81
HOMER3-201ENST00000221222 EVPLQ92817 2033 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 KLRC1P26715 233 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 GRB10Q13322 594 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 MTERF2Q49AM1 385 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 TMEM119Q4V9L6 283 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 SPECC1Q5M775 1068 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 USP49Q70CQ1 688 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 PIGOQ8TEQ8 1089 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 PCDHA2Q9Y5H9 948 aa26.37■■□□□ 1.81
HOMER3-201ENST00000221222 MAGEB2O15479 319 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 CYP2C9P11712 490 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 RARRES1P49788 294 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 NPEPPSP55786 919 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 TAF2Q6P1X5 1199 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 DHX38Q92620 1227 aaKnown RBP26.36■■□□□ 1.81
HOMER3-201ENST00000221222 CALML4Q96GE6 196 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 CDK5RAP3Q96JB5 506 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 CEP170P1Q96L14 293 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 TMEM39AQ9NV64 488 aa26.36■■□□□ 1.81
HOMER3-201ENST00000221222 KIAA0355O15063 1070 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 TXLNAP40222 546 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 RBL2Q08999 1139 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 TBC1D8BQ0IIM8 1120 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 XKR9Q5GH70 373 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 SHC4Q6S5L8 630 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 LBHD1Q9BQE6 289 aaPredicted RBP26.35■■□□□ 1.81
HOMER3-201ENST00000221222 SH2D3AQ9BRG2 576 aa26.35■■□□□ 1.81
HOMER3-201ENST00000221222 TRIM71Q2Q1W2 868 aaKnown RBP26.34■■□□□ 1.81
HOMER3-201ENST00000221222 RUFY4Q6ZNE9 571 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 SH3RF1Q7Z6J0 888 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 RPAINQ86UA6 219 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 CAGE1Q8TC20 777 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 WNT8BQ93098 351 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 ZBTB10Q96DT7 871 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 NOC4LQ9BVI4 516 aaKnown RBP26.34■■□□□ 1.81
HOMER3-201ENST00000221222 GDPD2Q9HCC8 539 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 PRDM5Q9NQX1 630 aaPredicted RBP26.34■■□□□ 1.81
HOMER3-201ENST00000221222 PRKAG2Q9UGJ0 569 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 DNM3Q9UQ16 869 aa26.34■■□□□ 1.81
HOMER3-201ENST00000221222 A0A087WWV3 80 aa26.33■■□□□ 1.81
HOMER3-201ENST00000221222 IGKV6-21A0A0C4DH24 114 aa26.33■■□□□ 1.81
HOMER3-201ENST00000221222 SMIM35A0A1B0GVV1 85 aa26.33■■□□□ 1.81
HOMER3-201ENST00000221222 MAFO75444 373 aaPredicted RBP26.33■■□□□ 1.81
HOMER3-201ENST00000221222 RPLP2P05387 115 aaKnown RBP26.33■■□□□ 1.81
HOMER3-201ENST00000221222 RFC5P40937 340 aa26.33■■□□□ 1.81
HOMER3-201ENST00000221222 KARSQ15046 597 aaKnown RBP26.33■■□□□ 1.81
HOMER3-201ENST00000221222 ZRSR1Q15695 479 aaKnown RBP26.33■■□□□ 1.81
HOMER3-201ENST00000221222 ADALQ6DHV7 355 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms