RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TSG101Q99816 390 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MYBP10242 640 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TGFB3P10600 412 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ZNF157P51786 506 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SWSAP1Q6NVH7 229 aa21.75■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SYNGAP1Q96PV0 1343 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 USP27XA6NNY8 438 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 BACH1O14867 736 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 HOXD13P35453 343 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TBX2Q13207 712 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PLA2G4FQ68DD2 849 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 CCDC43Q96MW1 224 aaKnown RBP21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ANKEF1Q9NU02 776 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SEL1LQ9UBV2 794 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 NKRFO15226 690 aaKnown RBP eCLIP21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 HIP1RO75146 1068 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FARP2O94887 1054 aaPredicted RBP21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 GCNT3O95395 438 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 BMT2Q1RMZ1 405 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MORC4Q8TE76 937 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TUBGCP2Q9BSJ2 902 aa21.74■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PASKQ96RG2 1323 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 USO1O60763 962 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PRPF6O94906 941 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 STBD1O95210 358 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ATG7O95352 703 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SUPT20HL2P0C7V6 817 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 SFPQP23246 707 aaKnown RBP eCLIP21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ADORA2AP29274 412 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 NPEPPSP55786 919 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FKBP3Q00688 224 aaKnown RBP21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FAM110CQ1W6H9 321 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 XKR9Q5GH70 373 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MIS18BP1Q6P0N0 1132 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 CENPFP49454 3210 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 IGSF9BQ9UPX0 1349 aa21.73■■□□□ 1.07
TNFRSF1A-201ENST00000162749 LOC102724159A0A0B4J2E5 919 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 DKC1O60832 514 aaKnown RBP eCLIP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 NMT1P30419 496 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 NEDD9Q14511 834 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PWP2Q15269 919 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 KNOP1Q1ED39 458 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ODR4Q5SWX8 454 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MAEAQ7L5Y9 396 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ZNF507Q8TCN5 953 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TSC1Q92574 1164 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 LGALS16A8MUM7 142 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 RIOK3O14730 519 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 RRP9O43818 475 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ARIH2O95376 493 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FGFR1OPO95684 399 aaKnown RBP21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 KCNA1Q09470 495 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FAM178BQ8IXR5 827 aa21.72■■□□□ 1.07
TNFRSF1A-201ENST00000162749 IGF2BP3O00425 579 aaKnown RBP eCLIP21.71■■□□□ 1.072e-6■■■□□ 18.3
TNFRSF1A-201ENST00000162749 TNNT1P13805 278 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 LY6KQ17RY6 165 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PPP4R3CPQ6ZMV5 832 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 FBXO16Q8IX29 292 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PKNOX2Q96KN3 472 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 DDX41Q9UJV9 622 aaKnown RBP21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 EIF3DO15371 548 aaKnown RBP eCLIP21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 STRNO43815 780 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 PRKCEQ02156 737 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 UBXN1Q04323 297 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 HSP90AA2PQ14568 343 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 EDRF1Q3B7T1 1238 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ZNF792Q3KQV3 632 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 RGMBQ6NW40 437 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 OTUD6AQ7L8S5 288 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ZNF720Q7Z2F6 126 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 ABRAQ8N0Z2 381 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 TRAF3IP3Q9Y228 551 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 MAFBQ9Y5Q3 323 aaPredicted RBP21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 IVNS1ABPQ9Y6Y0 642 aa21.71■■□□□ 1.07
TNFRSF1A-201ENST00000162749 GGPS1O95749 300 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 MTIF2P46199 727 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ZC2HC1CQ53FD0 456 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 MIIPQ5JXC2 388 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 METTL7BQ6UX53 244 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ITIH6Q6UXX5 1313 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 IGKV6D-21A0A0A0MT36 114 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 MANSC4A6NHS7 340 aaPredicted RBP21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ASB14A6NK59 587 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 PDXKO00764 312 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 GOLGA8FQ08AF8 430 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 GOLGA8DPQ0D2H9 430 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 CEP135Q66GS9 1140 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 KCNV1Q6PIU1 500 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ARMCX2Q7L311 632 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 GPR142Q7Z601 462 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ZC3H3Q8IXZ2 948 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 KCND1Q9NSA2 647 aa21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 LARSQ9P2J5 1176 aaKnown RBP21.7■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ZMYM2Q9UBW7 1377 aa21.69■■□□□ 1.06
TNFRSF1A-201ENST00000162749 GSTTP1A0A1W2PQM5 241 aa21.69■■□□□ 1.06
TNFRSF1A-201ENST00000162749 CEP170P1Q96L14 293 aa21.69■■□□□ 1.06
TNFRSF1A-201ENST00000162749 CEP63Q96MT8 703 aa21.69■■□□□ 1.06
TNFRSF1A-201ENST00000162749 TIPINQ9BVW5 301 aa21.69■■□□□ 1.06
TNFRSF1A-201ENST00000162749 ZNF302Q9NR11 478 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms