RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W TY1B-GR2Q12269 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-OLQ12273 1755 aa4.02□□□□□ -1.77
SEN1YLR430W TY1B-PLQ12414 1755 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W CYC1P00044 109 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W AAC1P04710 309 aa4.02□□□□□ -1.77
SEN1YLR430W NAM2P11325 894 aa4.02□□□□□ -1.77
SEN1YLR430W CAF20P12962 161 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W MRPL9P31334 269 aa4.02□□□□□ -1.77
SEN1YLR430W GDS1P41913 522 aa4.02□□□□□ -1.77
SEN1YLR430W YAE1P47118 141 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W GCV1P48015 400 aa4.02□□□□□ -1.77
SEN1YLR430W ASK10P48361 1146 aa4.02□□□□□ -1.77
SEN1YLR430W APM1Q00776 475 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W TOF2Q02208 771 aa4.02□□□□□ -1.77
SEN1YLR430W CUE4Q04201 117 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W ECM30Q06673 1274 aa4.02□□□□□ -1.77
SEN1YLR430W CYK3Q07533 885 aa4.02□□□□□ -1.77
SEN1YLR430W PSF1Q12488 208 aa4.02□□□□□ -1.77
SEN1YLR430W YBL029WP38201 376 aa4.02□□□□□ -1.77
SEN1YLR430W YEL025CP39991 1188 aa4.02□□□□□ -1.77
SEN1YLR430W BUR6P40096 142 aa4.02□□□□□ -1.77
SEN1YLR430W TRM44Q02648 567 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W RGT2Q12300 763 aa4.02□□□□□ -1.77
SEN1YLR430W CTT1P06115 562 aa4.02□□□□□ -1.77
SEN1YLR430W BUB3P26449 341 aa4.02□□□□□ -1.77
SEN1YLR430W CYS3P31373 394 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W MGM101P32787 269 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W EMP24P32803 203 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W BET3P36149 193 aa4.02□□□□□ -1.77
SEN1YLR430W SOL2P37262 315 aa4.02□□□□□ -1.77
SEN1YLR430W RCK1P38622 512 aa4.02□□□□□ -1.77
SEN1YLR430W MRX6P48564 524 aa4.02□□□□□ -1.77
SEN1YLR430W TPP1Q03796 238 aa4.02□□□□□ -1.77
SEN1YLR430W RFU1Q08003 200 aa4.02□□□□□ -1.77
SEN1YLR430W FMP25Q08023 583 aa4.02□□□□□ -1.77
SEN1YLR430W HFI1Q12060 488 aa4.02□□□□□ -1.77
SEN1YLR430W RRP42Q12277 265 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W UTP10P42945 1769 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W DFR1P07807 211 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SEN1YLR430W YER152CP10356 443 aa4.02□□□□□ -1.77
SEN1YLR430W MET8P15807 274 aa4.02□□□□□ -1.77
SEN1YLR430W CKS1P20486 150 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W PRE1P22141 198 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W RNA14P25298 677 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W PRM9P39551 298 aa4.02□□□□□ -1.77
SEN1YLR430W ISC1P40015 477 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W PCL7P40186 285 aa4.02□□□□□ -1.77
SEN1YLR430W CAK1P43568 368 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W PKP2P53170 491 aa4.02□□□□□ -1.77
SEN1YLR430W ODC1Q03028 310 aa4.02□□□□□ -1.77
SEN1YLR430W DCR2Q05924 578 aa4.02□□□□□ -1.77
SEN1YLR430W NYV1Q12255 253 aa4.02□□□□□ -1.77
SEN1YLR430W INH1P01097 85 aa4.02□□□□□ -1.77
SEN1YLR430W TAH1P25638 111 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W SYN8P31377 255 aa4.02□□□□□ -1.77
SEN1YLR430W MOT2P34909 587 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W YBR063CP38083 404 aa4.02□□□□□ -1.77
SEN1YLR430W CHS7P38843 316 aa4.02□□□□□ -1.77
SEN1YLR430W PHO90P39535 881 aa4.02□□□□□ -1.77
SEN1YLR430W FLC2P39719 783 aa4.02□□□□□ -1.77
SEN1YLR430W FMC1P40491 155 aa4.02□□□□□ -1.77
SEN1YLR430W ICE2P40499 491 aa4.02□□□□□ -1.77
SEN1YLR430W YGL204CP53089 101 aa4.02□□□□□ -1.77
SEN1YLR430W SLX9P53251 210 aaPredicted RBP4.02□□□□□ -1.77
SEN1YLR430W MTQ1P53944 314 aa4.02□□□□□ -1.77
SEN1YLR430W NAM8Q00539 523 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
SEN1YLR430W DIG2Q03373 323 aaKnown RBP4.02□□□□□ -1.77
SEN1YLR430W YDR124WQ04608 324 aa4.02□□□□□ -1.77
SEN1YLR430W SPR28Q04921 423 aa4.02□□□□□ -1.77
SEN1YLR430W STF1P01098 86 aa4.01□□□□□ -1.77
SEN1YLR430W HTS1P07263 546 aaKnown RBP4.01□□□□□ -1.77
SEN1YLR430W PRE7P23724 241 aaKnown RBP4.01□□□□□ -1.77
SEN1YLR430W YCL002CP25565 263 aa4.01□□□□□ -1.77
SEN1YLR430W YKL075CP36083 450 aa4.01□□□□□ -1.77
SEN1YLR430W RIB1P38066 345 aa4.01□□□□□ -1.77
SEN1YLR430W BMT5P40493 336 aa4.01□□□□□ -1.77
SEN1YLR430W CHA4P43634 648 aa4.01□□□□□ -1.77
SEN1YLR430W ATC1Q04005 294 aa4.01□□□□□ -1.77
SEN1YLR430W GPI11Q06636 219 aa4.01□□□□□ -1.77
SEN1YLR430W MRL1Q06815 381 aa4.01□□□□□ -1.77
SEN1YLR430W YDL199CQ12407 687 aa4.01□□□□□ -1.77
SEN1YLR430W GAP1P19145 602 aaPredicted RBP4.01□□□□□ -1.77
SEN1YLR430W CPR4P25334 318 aa4.01□□□□□ -1.77
SEN1YLR430W ARP2P32381 391 aaKnown RBP4.01□□□□□ -1.77
SEN1YLR430W GCD11P32481 527 aaKnown RBP4.01□□□□□ -1.77
SEN1YLR430W YKR051WP36142 418 aa4.01□□□□□ -1.77
SEN1YLR430W BIT2P38346 545 aa4.01□□□□□ -1.77
SEN1YLR430W ARH1P48360 493 aa4.01□□□□□ -1.77
SEN1YLR430W YGL159WP53110 370 aa4.01□□□□□ -1.77
SEN1YLR430W TNA1P53322 534 aa4.01□□□□□ -1.77
SEN1YLR430W HOL1P53389 586 aa4.01□□□□□ -1.77
SEN1YLR430W TRS31Q03337 283 aa4.01□□□□□ -1.77
SEN1YLR430W YPR127WQ06494 345 aa4.01□□□□□ -1.77
SEN1YLR430W CSM4Q08955 156 aa4.01□□□□□ -1.77
SEN1YLR430W SLM3Q12093 417 aa4.01□□□□□ -1.77
SEN1YLR430W RKM5Q12367 367 aa4.01□□□□□ -1.77
SEN1YLR430W AGC1Q12482 902 aa4.01□□□□□ -1.77
SEN1YLR430W SNF6P18888 332 aa4.01□□□□□ -1.77
SEN1YLR430W EPT1P22140 391 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms