RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W RPS17AP02407 136 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W UNG1P12887 359 aa4.19□□□□□ -1.74
SSH4YKL124W RPS17BP14127 136 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W NCP1P16603 691 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W PWP1P21304 576 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W RPI1P23250 407 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W SLM5P25345 492 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W PMT2P31382 759 aa4.19□□□□□ -1.74
SSH4YKL124W CDC12P32468 407 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W OMA1P36163 345 aa4.19□□□□□ -1.74
SSH4YKL124W APT2P36973 181 aa4.19□□□□□ -1.74
SSH4YKL124W SSZ1P38788 538 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W YHR097CP38809 366 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W PSA1P41940 361 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W AAD14P42884 376 aa4.19□□□□□ -1.74
SSH4YKL124W PRM10P42946 383 aa4.19□□□□□ -1.74
SSH4YKL124W BNA6P43619 295 aa4.19□□□□□ -1.74
SSH4YKL124W IKS1P47042 667 aa4.19□□□□□ -1.74
SSH4YKL124W JHD2P47156 728 aaPredicted RBP4.19□□□□□ -1.74
SSH4YKL124W YJR154WP47181 346 aa4.19□□□□□ -1.74
SSH4YKL124W SUT1P53032 299 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W ROG1P53118 685 aa4.19□□□□□ -1.74
SSH4YKL124W CGR1P53188 120 aa4.19□□□□□ -1.74
SSH4YKL124W YNL140CP53910 189 aa4.19□□□□□ -1.74
SSH4YKL124W URC2Q04411 772 aa4.19□□□□□ -1.74
SSH4YKL124W BOP2Q06150 570 aa4.19□□□□□ -1.74
SSH4YKL124W CDA1Q06702 301 aa4.19□□□□□ -1.74
SSH4YKL124W REX4Q08237 289 aa4.19□□□□□ -1.74
SSH4YKL124W TMA46Q12000 345 aaKnown RBP4.19□□□□□ -1.74
SSH4YKL124W YLR049CQ12110 428 aa4.19□□□□□ -1.74
SSH4YKL124W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
SSH4YKL124W RUP1Q12242 671 aa4.19□□□□□ -1.74
SSH4YKL124W YOL159C-AQ3E769 90 aa4.19□□□□□ -1.74
SSH4YKL124W YPT1P01123 206 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W RPP2BP02400 110 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W COS2P0CX12 379 aa4.18□□□□□ -1.74
SSH4YKL124W COS3P0CX13 379 aa4.18□□□□□ -1.74
SSH4YKL124W GCD2P12754 651 aaPredicted RBP4.18□□□□□ -1.74
SSH4YKL124W FUS3P16892 353 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W YPK2P18961 677 aa4.18□□□□□ -1.74
SSH4YKL124W SGV1P23293 657 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W PHO91P27514 894 aa4.18□□□□□ -1.74
SSH4YKL124W FAA1P30624 700 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W NUF2P33895 451 aa4.18□□□□□ -1.74
SSH4YKL124W TIF3P34167 436 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W DOA1P36037 715 aa4.18□□□□□ -1.74
SSH4YKL124W CTP1P38152 299 aa4.18□□□□□ -1.74
SSH4YKL124W YER010CP40011 234 aa4.18□□□□□ -1.74
SSH4YKL124W YIL152WP40455 235 aa4.18□□□□□ -1.74
SSH4YKL124W COS4P43542 379 aa4.18□□□□□ -1.74
SSH4YKL124W YPT32P51996 222 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W NOP19P53317 196 aaPredicted RBP4.18□□□□□ -1.74
SSH4YKL124W PDR16P53860 351 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W SPO19Q03029 223 aa4.18□□□□□ -1.74
SSH4YKL124W ABZ2Q03266 374 aa4.18□□□□□ -1.74
SSH4YKL124W DFG5Q05031 458 aa4.18□□□□□ -1.74
SSH4YKL124W RTT103Q05543 409 aa4.18□□□□□ -1.74
SSH4YKL124W YEH1Q07804 573 aa4.18□□□□□ -1.74
SSH4YKL124W ENT4Q07872 247 aa4.18□□□□□ -1.74
SSH4YKL124W YOL159CQ08300 171 aa4.18□□□□□ -1.74
SSH4YKL124W YDL176WQ12027 708 aa4.18□□□□□ -1.74
SSH4YKL124W GET4Q12125 312 aa4.18□□□□□ -1.74
SSH4YKL124W HER1Q12276 1246 aa4.18□□□□□ -1.74
SSH4YKL124W NOT5Q12514 560 aaPredicted RBP4.18□□□□□ -1.74
SSH4YKL124W HXK2P04807 486 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W STE7P06784 515 aa4.18□□□□□ -1.74
SSH4YKL124W COR1P07256 457 aa4.18□□□□□ -1.74
SSH4YKL124W ART10P18634 518 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W CHA1P25379 360 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W YCL049CP25577 312 aa4.18□□□□□ -1.74
SSH4YKL124W BUB2P26448 306 aaPredicted RBP4.18□□□□□ -1.74
SSH4YKL124W RPS27AP35997 82 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W VPS21P36017 210 aaKnown RBP4.18□□□□□ -1.74
SSH4YKL124W TPO5P36029 618 aa4.18□□□□□ -1.74
SSH4YKL124W CBP4P37267 147 aa4.18□□□□□ -1.74
SSH4YKL124W RPS27BP38711 82 aa4.18□□□□□ -1.74
SSH4YKL124W YRB2P40517 327 aa4.18□□□□□ -1.74
SSH4YKL124W GUS1P46655 708 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
SSH4YKL124W AIM22P47051 409 aa4.18□□□□□ -1.74
SSH4YKL124W SLD3P53135 668 aa4.18□□□□□ -1.74
SSH4YKL124W SCW11P53189 542 aa4.18□□□□□ -1.74
SSH4YKL124W IRC15Q02733 499 aa4.18□□□□□ -1.74
SSH4YKL124W MSC3Q05812 728 aa4.18□□□□□ -1.74
SSH4YKL124W MDM30Q05930 598 aa4.18□□□□□ -1.74
SSH4YKL124W PDR8Q06149 701 aa4.18□□□□□ -1.74
SSH4YKL124W GMC2Q06201 188 aa4.18□□□□□ -1.74
SSH4YKL124W TGS1Q12052 315 aa4.18□□□□□ -1.74
SSH4YKL124W YPR064WQ12492 139 aa4.18□□□□□ -1.74
SSH4YKL124W CYR1P08678 2026 aaKnown RBP4.17□□□□□ -1.74
SSH4YKL124W YBR056W-AI2HB52 66 aa4.17□□□□□ -1.74
SSH4YKL124W DSF1P0CX08 502 aa4.17□□□□□ -1.74
SSH4YKL124W YNR073CP0CX09 502 aa4.17□□□□□ -1.74
SSH4YKL124W MSS116P15424 664 aaKnown RBP4.17□□□□□ -1.74
SSH4YKL124W NAR1P23503 491 aaKnown RBP4.17□□□□□ -1.74
SSH4YKL124W DBR1P24309 405 aaKnown RBP4.17□□□□□ -1.74
SSH4YKL124W YSC84P32793 468 aa4.17□□□□□ -1.74
SSH4YKL124W SPO23P33757 523 aa4.17□□□□□ -1.74
SSH4YKL124W SEF1P34228 1148 aa4.17□□□□□ -1.74
SSH4YKL124W YKR078WP36158 585 aaKnown RBP4.17□□□□□ -1.74
SSH4YKL124W BNA4P38169 460 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms