RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C SLF1Q12034 447 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C TY1A-GR1Q12085 440 aa4.28□□□□□ -1.72
PRP28YDR243C RBD2Q12270 262 aa4.28□□□□□ -1.72
PRP28YDR243C LPX1Q12405 387 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C ERG27Q12452 347 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C TY1A-OLQ92392 440 aaKnown RBP4.28□□□□□ -1.72
PRP28YDR243C YLR462WO13556 202 aa4.27□□□□□ -1.73
PRP28YDR243C NUC1P08466 329 aa4.27□□□□□ -1.73
PRP28YDR243C RAD18P10862 487 aa4.27□□□□□ -1.73
PRP28YDR243C RPS1BP23248 255 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C AHC2P25649 128 aa4.27□□□□□ -1.73
PRP28YDR243C CDC20P26309 610 aa4.27□□□□□ -1.73
PRP28YDR243C IMP2'P32351 346 aa4.27□□□□□ -1.73
PRP28YDR243C SRB6P32570 121 aa4.27□□□□□ -1.73
PRP28YDR243C RPS1AP33442 255 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C HIS7P33734 552 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C SRO77P38163 1010 aa4.27□□□□□ -1.73
PRP28YDR243C YBR013CP38215 129 aa4.27□□□□□ -1.73
PRP28YDR243C VHC1P38329 1120 aa4.27□□□□□ -1.73
PRP28YDR243C YHL049CP38722 271 aa4.27□□□□□ -1.73
PRP28YDR243C NSG1P38837 291 aa4.27□□□□□ -1.73
PRP28YDR243C YEL075CP39972 122 aa4.27□□□□□ -1.73
PRP28YDR243C YER189WP40104 122 aa4.27□□□□□ -1.73
PRP28YDR243C LAS21P40367 830 aa4.27□□□□□ -1.73
PRP28YDR243C RPL10P41805 221 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C YGR201CP42936 225 aa4.27□□□□□ -1.73
PRP28YDR243C YFL064CP43540 174 aa4.27□□□□□ -1.73
PRP28YDR243C NET1P47035 1189 aa4.27□□□□□ -1.73
PRP28YDR243C BIO3P50277 480 aa4.27□□□□□ -1.73
PRP28YDR243C MRH4P53166 561 aa4.27□□□□□ -1.73
PRP28YDR243C YGR017WP53210 297 aa4.27□□□□□ -1.73
PRP28YDR243C BIO5P53744 561 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C MRPL22P53881 309 aa4.27□□□□□ -1.73
PRP28YDR243C SAE3P89114 91 aa4.27□□□□□ -1.73
PRP28YDR243C REG1Q00816 1014 aa4.27□□□□□ -1.73
PRP28YDR243C TIM44Q01852 431 aa4.27□□□□□ -1.73
PRP28YDR243C YDC1Q02896 317 aa4.27□□□□□ -1.73
PRP28YDR243C YPL113CQ02961 396 aa4.27□□□□□ -1.73
PRP28YDR243C MSC1Q03104 513 aa4.27□□□□□ -1.73
PRP28YDR243C SNU56Q03782 492 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C YET2Q04210 160 aa4.27□□□□□ -1.73
PRP28YDR243C YLR053CQ12026 108 aa4.27□□□□□ -1.73
PRP28YDR243C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PRP28YDR243C INP53Q12271 1107 aa4.27□□□□□ -1.73
PRP28YDR243C SPE4Q12455 300 aa4.27□□□□□ -1.73
PRP28YDR243C PTC5Q12511 572 aa4.27□□□□□ -1.73
PRP28YDR243C PRC1P00729 532 aa4.27□□□□□ -1.73
PRP28YDR243C AI3P03877 415 aa4.27□□□□□ -1.73
PRP28YDR243C GAL80P04387 435 aa4.27□□□□□ -1.73
PRP28YDR243C DFR1P07807 211 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PRP28YDR243C PRE1P22141 198 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C GRR1P24814 1151 aa4.27□□□□□ -1.73
PRP28YDR243C PEX4P29340 183 aa4.27□□□□□ -1.73
PRP28YDR243C SPR1P32603 445 aa4.27□□□□□ -1.73
PRP28YDR243C YSC84P32793 468 aa4.27□□□□□ -1.73
PRP28YDR243C RGT1P32862 1170 aa4.27□□□□□ -1.73
PRP28YDR243C TFA2P36145 328 aa4.27□□□□□ -1.73
PRP28YDR243C FIG1P38224 298 aa4.27□□□□□ -1.73
PRP28YDR243C FMP23P38231 175 aa4.27□□□□□ -1.73
PRP28YDR243C LAG1P38703 411 aa4.27□□□□□ -1.73
PRP28YDR243C NSE4P43124 402 aa4.27□□□□□ -1.73
PRP28YDR243C BUD13P46947 266 aaPredicted RBP4.27□□□□□ -1.73
PRP28YDR243C MRX5P47007 382 aa4.27□□□□□ -1.73
PRP28YDR243C SOL1P50278 321 aa4.27□□□□□ -1.73
PRP28YDR243C NBP35P52920 328 aa4.27□□□□□ -1.73
PRP28YDR243C YNL181WP53878 407 aa4.27□□□□□ -1.73
PRP28YDR243C IDP3P53982 420 aaKnown RBP4.27□□□□□ -1.73
PRP28YDR243C YPL080CQ02826 108 aa4.27□□□□□ -1.73
PRP28YDR243C SKY1Q03656 742 aa4.27□□□□□ -1.73
PRP28YDR243C PEX12Q04370 399 aa4.27□□□□□ -1.73
PRP28YDR243C TVP18Q04767 167 aa4.27□□□□□ -1.73
PRP28YDR243C YLR224WQ05947 369 aa4.27□□□□□ -1.73
PRP28YDR243C PSR2Q07949 397 aa4.27□□□□□ -1.73
PRP28YDR243C GUP2Q08929 609 aa4.27□□□□□ -1.73
PRP28YDR243C OXR1Q08952 273 aa4.27□□□□□ -1.73
PRP28YDR243C YPL199CQ08954 240 aa4.27□□□□□ -1.73
PRP28YDR243C NYV1Q12255 253 aa4.27□□□□□ -1.73
PRP28YDR243C WIP1Q2V2P8 89 aa4.27□□□□□ -1.73
PRP28YDR243C GCR1P07261 785 aa4.26□□□□□ -1.73
PRP28YDR243C NHP6AP11632 93 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C SPO7P18410 259 aa4.26□□□□□ -1.73
PRP28YDR243C IDP1P21954 428 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C DCC1P25559 380 aa4.26□□□□□ -1.73
PRP28YDR243C YCL049CP25577 312 aa4.26□□□□□ -1.73
PRP28YDR243C CAP1P28495 268 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C HEM12P32347 362 aaPredicted RBP4.26□□□□□ -1.73
PRP28YDR243C PDC2P32896 925 aa4.26□□□□□ -1.73
PRP28YDR243C YPT7P32939 208 aa4.26□□□□□ -1.73
PRP28YDR243C RPT3P33298 428 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C SSS1P35179 80 aa4.26□□□□□ -1.73
PRP28YDR243C CSG2P35206 410 aa4.26□□□□□ -1.73
PRP28YDR243C SNU114P36048 1008 aaKnown RBP4.26□□□□□ -1.73
PRP28YDR243C GPT2P36148 743 aa4.26□□□□□ -1.73
PRP28YDR243C SOL2P37262 315 aa4.26□□□□□ -1.73
PRP28YDR243C RRN10P38204 145 aa4.26□□□□□ -1.73
PRP28YDR243C HSL7P38274 827 aa4.26□□□□□ -1.73
PRP28YDR243C EXO5P38289 585 aa4.26□□□□□ -1.73
PRP28YDR243C HIS2P38635 335 aa4.26□□□□□ -1.73
PRP28YDR243C YJL206CP39529 758 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms