RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	POP4	P38336	279 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	YMR262W	P38430	313 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	RPP1	P38786	293 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	RIX1	P38883	763 aa	Predicted RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
YAL004W	YAL004W	CCT2	P39076	527 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	PLB1	P39105	664 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ELO1	P39540	310 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	BIO3	P50277	480 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	VPS73	P53142	486 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	MTL1	P53214	551 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	GTF1	P53260	183 aa	Predicted RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	FHN1	P53279	174 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	YNL260C	P53846	198 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	IVY1	Q04934	453 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	FAR8	Q05040	523 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	PIG1	Q06216	648 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	MRI1	Q06489	411 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	IPK1	Q06667	281 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	LOT6	Q07923	191 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	BSC6	Q08280	497 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	ABP140	Q08641	628 aa	Known RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	MRH1	Q12117	320 aa	Predicted RBP	3.48	□□□□□ -1.85
YAL004W	YAL004W	GET4	Q12125	312 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	YDR018C	Q12185	396 aa		3.48	□□□□□ -1.85
YAL004W	YAL004W	COX1	P00401	534 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	GPH1	P06738	902 aa	Known RBP	3.47	□□□□□ -1.85
YAL004W	YAL004W	MAS1	P10507	462 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	POX1	P13711	748 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	SNA3	P14359	133 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	CBF1	P17106	351 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	HXT2	P23585	541 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	YSP3	P25036	478 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	MGR1	P25573	417 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	YPS1	P32329	569 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	ACP1	P32463	125 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	RAD23	P32628	398 aa	Known RBP	3.47	□□□□□ -1.85
YAL004W	YAL004W	ECT1	P33412	323 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	LHS1	P36016	881 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	MRPL7	P36519	292 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	SPC97	P38863	823 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	ALP1	P38971	573 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	ECM10	P39987	644 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	DSE1	P40077	573 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	TDA10	P42938	290 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	LOH1	P47055	219 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	SCS3	P53012	380 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	YGL108C	P53139	140 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.47	□□□□□ -1.85	not detected
YAL004W	YAL004W	STD1	Q02794	444 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	RRP17	Q04031	235 aa	Predicted RBP	3.47	□□□□□ -1.85
YAL004W	YAL004W	YMR027W	Q04371	470 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	YDR109C	Q04585	715 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	CTS2	Q06350	511 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	CYK3	Q07533	885 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	TPO1	Q07824	586 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	CMS1	Q07897	291 aa	Known RBP	3.47	□□□□□ -1.85
YAL004W	YAL004W	PEX27	Q08580	376 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	RDR1	Q08904	546 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	YOR012W	Q12351	137 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	AI5_ALPHA	Q9ZZX1	630 aa		3.47	□□□□□ -1.85
YAL004W	YAL004W	RHO2	P06781	192 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	CHS1	P08004	1131 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	IMA3	P0CW40	589 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	IMA4	P0CW41	589 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	RAP1	P11938	827 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	WHI2	P12611	486 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	GLN3	P18494	730 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	RRT12	P25381	491 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	KAR4	P25583	335 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	GAC1	P28006	793 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	PRR1	P28708	518 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	ZIP1	P31111	875 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	TPS2	P31688	896 aa	Known RBP	3.46	□□□□□ -1.86
YAL004W	YAL004W	MSS51	P32335	436 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	IMP3	P32899	183 aa	Predicted RBP	3.46	□□□□□ -1.86
YAL004W	YAL004W	HES1	P35843	434 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	SNU114	P36048	1008 aa	Known RBP	3.46	□□□□□ -1.86
YAL004W	YAL004W	RPF2	P36160	344 aa	Known RBP	3.46	□□□□□ -1.86
YAL004W	YAL004W	YBR032W	P38223	100 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	STN1	P38960	494 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	MTW1	P39731	289 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	YER186C	P40101	306 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	MSY1	P48527	492 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	AMA1	P50082	593 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	RMR1	P53060	241 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	YPR003C	P53394	754 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	TAF12	Q03761	539 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	SPC24	Q04477	213 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	PRM6	Q04705	352 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	PDR8	Q06149	701 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	GGA1	Q06336	557 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	SHS1	Q07657	551 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	TEN1	Q07921	160 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	AIM39	Q08223	395 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	IMA2	Q08295	589 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
YAL004W	YAL004W	SPO24	Q3E752	67 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	LAG2	Q92325	660 aa		3.46	□□□□□ -1.86
YAL004W	YAL004W	AAC1	P04710	309 aa		3.45	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms