RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	CRIPAK	Q8N1N5	446 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	NCOA7	Q8NI08	942 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	SPPL3	Q8TCT6	385 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	IGDCC4	Q8TDY8	1250 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	POF1B	Q8WVV4	589 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	SEPT1	Q8WYJ6	367 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	GLG1	Q92896	1179 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	CUL5	Q93034	780 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	NEK1	Q96PY6	1258 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	POP1	Q99575	1024 aa	Known RBP	11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	KIF2C	Q99661	725 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	PLVAP	Q9BX97	442 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	SPZ1	Q9BXG8	430 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	ERAP1	Q9NZ08	941 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	HCST	Q9UBK5	93 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	CYP46A1	Q9Y6A2	500 aa		11.46	□□□□□ -0.57
PHGDH-222	ENST00000641587	KMT2E	Q8IZD2	1858 aa		11.46	□□□□□ -0.58
PHGDH-222	ENST00000641587	CFAP54	Q96N23	3096 aa		11.46	□□□□□ -0.58
PHGDH-222	ENST00000641587	MYO15A	Q9UKN7	3530 aa		11.46	□□□□□ -0.58
PHGDH-222	ENST00000641587	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	PIK3CD	O00329	1044 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	ST18	O60284	1047 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	PPFIA3	O75145	1194 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	EYA4	O95677	639 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	INSRR	P14616	1297 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	CPA1	P15085	419 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	NEK4	P51957	841 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	TMEM266	Q2M3C6	531 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	TSGA10IP	Q3SY00	556 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	RSPH3	Q86UC2	560 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	CMTR2	Q8IYT2	770 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	SRBD1	Q8N5C6	995 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	SMRP1	Q8NCR6	262 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	EDA	Q92838	391 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	P2RX5	Q93086	422 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	GPRASP2	Q96D09	838 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	RRP36	Q96EU6	259 aa	Known RBP	11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	MFSD14A	Q96MC6	490 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	KCNH6	Q9H252	994 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	TMX1	Q9H3N1	280 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	LY9	Q9HBG7	655 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	PADI3	Q9ULW8	664 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	ZDBF2	Q9HCK1	2354 aa		11.45	□□□□□ -0.58
PHGDH-222	ENST00000641587	TMEM221	A6NGB7	291 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587		M0R296	226 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	PER2	O15055	1255 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	MGEA5	O60502	916 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	HMGB1	P09429	215 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	FGD1	P98174	961 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	MTMR1	Q13613	665 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	SART3	Q15020	963 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	XRRA1	Q6P2D8	792 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	NPAS4	Q8IUM7	802 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	EFHB	Q8N7U6	833 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	VN1R2	Q8NFZ6	395 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	CTCFL	Q8NI51	663 aa	Predicted RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	PGBD1	Q96JS3	809 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	TM6SF1	Q9BZW5	370 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	SMARCAD1	Q9H4L7	1026 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	PDRG1	Q9NUG6	133 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	FAM86C1	Q9NVL1	165 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	SEC63	Q9UGP8	760 aa	Known RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	USP15	Q9Y4E8	981 aa	Predicted RBP	11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	TRPV2	Q9Y5S1	764 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	UBIAD1	Q9Y5Z9	338 aa		11.44	□□□□□ -0.58
PHGDH-222	ENST00000641587	IGSF9B	Q9UPX0	1349 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	LOC730098	B7Z3J9	87 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	DDAH1	O94760	285 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	SCG2	P13521	617 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	RPS6KB1	P23443	525 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PAK2	Q13177	524 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PLCB4	Q15147	1175 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	TRIM67	Q6ZTA4	783 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	RUFY3	Q7L099	469 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	HSCB	Q8IWL3	235 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	CCDC82	Q8N4S0	544 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	CYP2W1	Q8TAV3	490 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PBXIP1	Q96AQ6	731 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	RPGRIP1	Q96KN7	1286 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	TCEANC2	Q96MN5	208 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PSTPIP2	Q9H939	334 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	ZSWIM6	Q9HCJ5	1215 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PCDHA6	Q9UN73	950 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	TRPC6	Q9Y210	931 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	PCDHA8	Q9Y5H6	950 aa		11.43	□□□□□ -0.58
PHGDH-222	ENST00000641587	EVPL	Q92817	2033 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	PRC1	O43663	620 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	MCM5	P33992	734 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	VCP	P55072	806 aa	Known RBP	11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	ZXDA	P98168	799 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	TCF15	Q12870	199 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	NFX1	Q12986	1120 aa	Known RBP	11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	COASY	Q13057	564 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	BECN1	Q14457	450 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	IER5	Q5VY09	327 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	DHX32	Q7L7V1	743 aa	Known RBP	11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	TMEM40	Q8WWA1	233 aa		11.42	□□□□□ -0.58
PHGDH-222	ENST00000641587	PPP2R3C	Q969Q6	453 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms