RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), human

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-216	ENST00000638448	OTOP3	Q7RTS5	596 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	NME9	Q86XW9	330 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	NOSTRIN	Q8IVI9	506 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	TTC8	Q8TAM2	541 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	UHMK1	Q8TAS1	419 aa	Known RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	MZB1	Q8WU39	189 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	DPF3	Q92784	378 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	DACT3	Q96B18	629 aa	Predicted RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	FUBP3	Q96I24	572 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	AIFM3	Q96NN9	605 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	GPR101	Q96P66	508 aa	Predicted RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	SMAD5	Q99717	465 aa	Known RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	CCDC8	Q9H0W5	538 aa	Predicted RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	WNT8A	Q9H1J5	351 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	ARNT2	Q9HBZ2	717 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	ACSS2	Q9NR19	701 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	CATSPERZ	Q9NTU4	200 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	CLDND1	Q9NY35	253 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	ZNF180	Q9UJW8	692 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	SRPK3	Q9UPE1	567 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	ANKRD6	Q9Y2G4	727 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	GIT1	Q9Y2X7	761 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	B3GALT1	Q9Y5Z6	326 aa		3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.91	□□□□□ -1.78
GYPB-216	ENST00000638448	KRIT1	O00522	736 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ABLIM1	O14639	778 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ERC2	O15083	957 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	TGM5	O43548	720 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	HIP1R	O75146	1068 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	SNUPN	O95149	360 aa	Known RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	AMY2A	P04746	511 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MPO	P05164	745 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	KRT18	P05783	430 aa	Known RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MYL1	P05976	194 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	GNAT1	P11488	350 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ZSCAN20	P17040	1043 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ATF3	P18847	181 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	AMY2B	P19961	511 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	SDHA	P31040	664 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ARL4A	P40617	200 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	DNM2	P50570	870 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	EPHA5	P54756	1037 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	CYP4F8	P98187	520 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	IRF9	Q00978	393 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	LRRC41	Q15345	812 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ZNF174	Q15697	407 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	PLEKHN1	Q494U1	663 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	LCE5A	Q5TCM9	118 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	CC2D1A	Q6P1N0	951 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	RPTN	Q6XPR3	784 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	DGKH	Q86XP1	1220 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	CPNE8	Q86YQ8	564 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	IGDCC3	Q8IVU1	814 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	TMEM151B	Q8IW70	566 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	WDR75	Q8IWA0	830 aa	Known RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	TMEFF1	Q8IYR6	380 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	CPA6	Q8N4T0	437 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	CISD2	Q8N5K1	135 aa	Known RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	SAMD3	Q8N6K7	520 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MARCH10	Q8NA82	808 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	TMEM52	Q8NDY8	209 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	C1orf162	Q8NEQ5	155 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	PHOSPHO1	Q8TCT1	267 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	JPH3	Q8WXH2	748 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	DLG3	Q92796	817 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ACAP3	Q96P50	834 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	PSMD1	Q99460	953 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MTA3	Q9BTC8	594 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	KRTAP9-3	Q9BYQ3	159 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MYH16	Q9H6N6	1097 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	SLC6A20	Q9NP91	592 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	PRDM11	Q9NQV5	511 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	FBXL7	Q9UJT9	491 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ACSL6	Q9UKU0	697 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	ZNF652	Q9Y2D9	606 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	COA3	Q9Y2R0	106 aa	Predicted RBP	3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	MRFAP1	Q9Y605	127 aa		3.9	□□□□□ -1.79
GYPB-216	ENST00000638448	TPD52L2	O43399	206 aa	Known RBP	3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	MSL3P1	P0C860	447 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	CD40	P25942	277 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	CYP2C19	P33261	490 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	NCKAP1L	P55160	1127 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	JAM2	P57087	298 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	PURA	Q00577	322 aa	Known RBP	3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	MLC1	Q15049	377 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	EPHA7	Q15375	998 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	PTPN21	Q16825	1174 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	ABCB5	Q2M3G0	1257 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	VMAC	Q2NL98	169 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	BROX	Q5VW32	411 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	ARHGAP36	Q6ZRI8	547 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	CEP68	Q76N32	757 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	SMC5	Q8IY18	1101 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	KIAA1958	Q8N8K9	716 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	PLEKHO2	Q8TD55	490 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	MORC4	Q8TE76	937 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	LMBR1	Q8WVP7	490 aa		3.89	□□□□□ -1.79
GYPB-216	ENST00000638448	TRMT2B	Q96GJ1	504 aa	Known RBP	3.89	□□□□□ -1.79

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