RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-223	ENST00000627440	TRABD2B	A6NFA1	517 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	USP17L12	C9JPN9	530 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	USP17L21	D6R901	530 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CLASP2	O75122	1294 aa	Known RBP	7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	RPP40	O75818	363 aa	Known RBP	7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	HLA-DOA	P06340	250 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CCDC192	P0DO97	292 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CA8	P35219	290 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	EIF2S3	P41091	472 aa	Known RBP	7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	ALDH7A1	P49419	539 aa	Known RBP	7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CASP7	P55210	303 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	FAM193A	P78312	1265 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CREB5	Q02930	508 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	PDE4B	Q07343	736 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	ABCB5	Q2M3G0	1257 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	METTL24	Q5JXM2	366 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CLEC18B	Q6UXF7	455 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	TMC7	Q7Z402	723 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	WDR5B	Q86VZ2	330 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	C7orf31	Q8N865	590 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	CLEC18C	Q8NCF0	446 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	FEZF2	Q8TBJ5	459 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	GAB3	Q8WWW8	586 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	PUS3	Q9BZE2	481 aa	Known RBP	7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	VTA1	Q9NP79	307 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	ADAMTS5	Q9UNA0	930 aa		7.74	□□□□□ -1.17
SNAP23-223	ENST00000627440	SEMA3E	O15041	775 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	ATMIN	O43313	823 aa	Predicted RBP	7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	ZMYND10	O75800	440 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	PDE4A	P27815	886 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	CNTN2	Q02246	1040 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	FZD5	Q13467	585 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	HTR4	Q13639	388 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	HNRNPD	Q14103	355 aa	Known RBP	7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	LMBR1L	Q6UX01	489 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	ATG9A	Q7Z3C6	839 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	SPICE1	Q8N0Z3	855 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	TMEM87A	Q8NBN3	555 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	MRPS27	Q92552	414 aa	Known RBP	7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	CFAP53	Q96M91	514 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	WDR11	Q9BZH6	1224 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	HDAC6	Q9UBN7	1215 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	NDRG2	Q9UN36	371 aa	Known RBP	7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	MYH7B	A7E2Y1	1941 aa		7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	UTP20	O75691	2785 aa	Known RBP	7.73	□□□□□ -1.17
SNAP23-223	ENST00000627440	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440		A6NJR5	290 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	CTSH	P09668	335 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	FTH1P19	P0C7X4	201 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	FOXO4	P98177	505 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	SMC1A	Q14683	1233 aa	Known RBP	7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	PKDCC	Q504Y2	493 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	ZNF710	Q8N1W2	664 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	PNPLA1	Q8N8W4	532 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	REPS2	Q8NFH8	660 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	GLG1	Q92896	1179 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	KIF2C	Q99661	725 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	ABCF2	Q9UG63	623 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	FBXO40	Q9UH90	709 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	RIPK3	Q9Y572	518 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	PARP14	Q460N5	1801 aa		7.72	□□□□□ -1.17
SNAP23-223	ENST00000627440	LAMA1	P25391	3075 aa		7.71	□□□□□ -1.17
SNAP23-223	ENST00000627440		A0A1W2PRG0	241 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	PI4KAP2	A4QPH2	592 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	UPK3BL1	B0FP48	263 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	UPK3BL2	E5RIL1	263 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	ANHX	E9PGG2	379 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	EPCAM	P16422	314 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	CERKL	Q49MI3	558 aa	Predicted RBP	7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	KIAA1755	Q5JYT7	1200 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	KSR2	Q6VAB6	950 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	PI4KAP1	Q8N8J0	262 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	ST13P5	Q8NFI4	369 aa	Predicted RBP	7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	BAP1	Q92560	729 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	MYH16	Q9H6N6	1097 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	FBXO28	Q9NVF7	368 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	PALD1	Q9ULE6	856 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	PPP1R9A	Q9ULJ8	1098 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	DDX49	Q9Y6V7	483 aa	Known RBP	7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	CLUH	O75153	1309 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	CABIN1	Q9Y6J0	2220 aa		7.71	□□□□□ -1.18
SNAP23-223	ENST00000627440	MGA	Q8IWI9	3026 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	HIVEP3	Q5T1R4	2406 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	TTC3	P53804	2025 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	BCLAF3	A2AJT9	711 aa	Known RBP	7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	C2orf71	A6NGG8	1288 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440		K7ESF4	209 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	PDE8B	O95263	885 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	PAPSS2	O95340	614 aa	Predicted RBP	7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	HOXB4	P17483	251 aa	Predicted RBP	7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	MAPK8	P45983	427 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	SEMA3B	Q13214	749 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	ELF2	Q15723	593 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	TATDN1	Q6P1N9	297 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	PDXDC2P	Q6P474	469 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	C15orf39	Q6ZRI6	1047 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	MAPKAPK5	Q8IW41	473 aa		7.7	□□□□□ -1.18
SNAP23-223	ENST00000627440	DHX37	Q8IY37	1157 aa	Known RBP	7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms