RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SMAP1Q8IYB5 467 aaPredicted RBP23.76■■□□□ 1.39
SPAST-204ENST00000621856 SCFD1Q8WVM8 642 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 BRI3BPQ8WY22 251 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 MRPL44Q9H9J2 332 aaKnown RBP23.76■■□□□ 1.39
SPAST-204ENST00000621856 SLC9A2Q9UBY0 812 aa23.76■■□□□ 1.39
SPAST-204ENST00000621856 PES1O00541 588 aaKnown RBP23.75■■□□□ 1.39
SPAST-204ENST00000621856 ICAM3P32942 547 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 MTIF2P46199 727 aaKnown RBP23.75■■□□□ 1.39
SPAST-204ENST00000621856 SP4Q02446 784 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 SPRYD7Q5W111 196 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 FOXR2Q6PJQ5 311 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 PADI6Q6TGC4 694 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 ANKRD23Q86SG2 305 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 MYCT1Q8N699 235 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 ODF2LQ9ULJ1 636 aa23.75■■□□□ 1.39
SPAST-204ENST00000621856 SFI1A8K8P3 1242 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 NRDCO43847 1150 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 SORBS3O60504 671 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 PGK2P07205 417 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 EDNRBP24530 442 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 GUCY2CP25092 1073 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 YWHABP31946 246 aaKnown RBP23.74■■□□□ 1.39
SPAST-204ENST00000621856 TBX2Q13207 712 aaPredicted RBP23.74■■□□□ 1.39
SPAST-204ENST00000621856 SHCBP1Q8NEM2 672 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 KIAA1524Q8TCG1 905 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 PARVGQ9HBI0 331 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 MYH11P35749 1972 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 WDR81Q562E7 1941 aa23.74■■□□□ 1.39
SPAST-204ENST00000621856 PSAPP07602 524 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 ZBTB48P10074 688 aaPredicted RBP23.73■■□□□ 1.39
SPAST-204ENST00000621856 MYBP10242 640 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 SKILP12757 684 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 PRKCSHP14314 528 aaPredicted RBP23.73■■□□□ 1.39
SPAST-204ENST00000621856 RARRES1P49788 294 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 CASP5P51878 434 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 CCNA1P78396 465 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 C17orf53Q8N3J3 647 aaPredicted RBP23.73■■□□□ 1.39
SPAST-204ENST00000621856 GPRC5AQ8NFJ5 357 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 TUBGCP2Q9BSJ2 902 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 BCAS3Q9H6U6 928 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 TRPM7Q96QT4 1865 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 LRRC37A2A6NM11 1700 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 LGALS16A8MUM7 142 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 DKC1O60832 514 aaKnown RBP eCLIP23.73■■□□□ 1.39
SPAST-204ENST00000621856 GCNT3O95395 438 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 PBX1P40424 430 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 CCZ1BP86790 482 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 CCZ1P86791 482 aaPredicted RBP23.73■■□□□ 1.39
SPAST-204ENST00000621856 UBXN1Q04323 297 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 ZCWPW2Q504Y3 356 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 OLFML3Q9NRN5 406 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 GABBR1Q9UBS5 961 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 SEL1LQ9UBV2 794 aa23.73■■□□□ 1.39
SPAST-204ENST00000621856 ZNFX1Q9P2E3 1918 aaKnown RBP23.72■■□□□ 1.39
SPAST-204ENST00000621856 ACTR2P61160 394 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 CHADLQ6NUI6 762 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 MIS18BP1Q6P0N0 1132 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 EPM2AIP1Q7L775 607 aaPredicted RBP23.72■■□□□ 1.39
SPAST-204ENST00000621856 TRMT1LQ7Z2T5 733 aaKnown RBP23.72■■□□□ 1.39
SPAST-204ENST00000621856 PPFIBP1Q86W92 1011 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 ATP6V0A1Q93050 837 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 KCTD10Q9H3F6 313 aa23.72■■□□□ 1.39
SPAST-204ENST00000621856 HIP1RO75146 1068 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 PRPF6O94906 941 aaKnown RBP23.71■■□□□ 1.39
SPAST-204ENST00000621856 FKBP3Q00688 224 aaKnown RBP23.71■■□□□ 1.39
SPAST-204ENST00000621856 SP2Q02086 613 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 CST9Q5W186 159 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 LRRC55Q6ZSA7 311 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 ANKRD13CQ8N6S4 541 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 PORCNQ9H237 461 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 EFCC1Q9HA90 598 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 ANKEF1Q9NU02 776 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 ITIH6Q6UXX5 1313 aa23.71■■□□□ 1.39
SPAST-204ENST00000621856 DNAJC25-GNG10A0A024R161 153 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 USO1O60763 962 aaKnown RBP23.7■■□□□ 1.39
SPAST-204ENST00000621856 GCLCP48506 637 aaPredicted RBP23.7■■□□□ 1.39
SPAST-204ENST00000621856 ZNF131P52739 623 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 HUNKP57058 714 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 GOLGA8FQ08AF8 430 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 GOLGA8DPQ0D2H9 430 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 KNOP1Q1ED39 458 aaKnown RBP23.7■■□□□ 1.39
SPAST-204ENST00000621856 XKR9Q5GH70 373 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 UTP14CQ5TAP6 766 aaKnown RBP23.7■■□□□ 1.39
SPAST-204ENST00000621856 SWSAP1Q6NVH7 229 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 PPP4R3CPQ6ZMV5 832 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 CYFIP1Q7L576 1253 aa23.7■■□□□ 1.39
SPAST-204ENST00000621856 NOC4LQ9BVI4 516 aaKnown RBP23.7■■□□□ 1.39
SPAST-204ENST00000621856 TMEM150BA6NC51 233 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 BACH1O14867 736 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 NOLC1Q14978 699 aaKnown RBP eCLIP23.7■■□□□ 1.38
SPAST-204ENST00000621856 MAEAQ7L5Y9 396 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 EEPD1Q7L9B9 569 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 FAM178BQ8IXR5 827 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 FGD4Q96M96 766 aa23.7■■□□□ 1.38
SPAST-204ENST00000621856 ITGBL1O95965 494 aaPredicted RBP23.69■■□□□ 1.38
SPAST-204ENST00000621856 SUPT20HL2P0C7V6 817 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 NMT1P30419 496 aaKnown RBP23.69■■□□□ 1.38
SPAST-204ENST00000621856 DNM2P50570 870 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 BMT2Q1RMZ1 405 aa23.69■■□□□ 1.38
SPAST-204ENST00000621856 ODR4Q5SWX8 454 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms