RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PAGE5Q96GU1 130 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 PDE8BO95263 885 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
USP6NL-205ENST00000609104 ASXL2Q76L83 1435 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 FLOT2Q14254 428 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 UBE3CQ15386 1083 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 VSTM4Q8IW00 320 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 MB21D1Q8N884 522 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 TRIM55Q9BYV6 548 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 PAMP19021 973 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 ZMYM1Q5SVZ6 1142 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 ZBED6P86452 979 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 UBE2SQ16763 222 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 FBXO38Q6PIJ6 1188 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
USP6NL-205ENST00000609104 LMCD1Q9NZU5 365 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 L3MBTL1Q9Y468 752 aa14.04□□□□□ -0.16
USP6NL-205ENST00000609104 RPF1Q9H9Y2 349 aaKnown RBP14.04□□□□□ -0.16
USP6NL-205ENST00000609104 PNMA6AP0CW24 399 aaPredicted RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 KCNA1Q09470 495 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 MYO1EQ12965 1108 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 SNX19Q92543 992 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 COPEO14579 308 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 CD2BP2O95400 341 aaKnown RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 TEX14Q8IWB6 1497 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 IPO5O00410 1097 aaKnown RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 PODXLO00592 558 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 BNIP3LO60238 219 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 OCA2Q04671 838 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 MTRQ99707 1265 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 SLC24A3Q9HC58 644 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 MYOM2P54296 1465 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 GTPBP10A4D1E9 387 aaKnown RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 FGGP02679 453 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 MECOMQ03112 1051 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 TTLL11Q8NHH1 800 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 SYNDIG1LA6NDD5 238 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 PRPF38AQ8NAV1 312 aaKnown RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 CYP21A2P08686 494 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 EXOC8Q8IYI6 725 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 SIX6OS1Q8N1H7 587 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 WARS2Q9UGM6 360 aaKnown RBP14.03□□□□□ -0.16
USP6NL-205ENST00000609104 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 RASA4BC9J798 803 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 RASA4O43374 803 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 HSPA2P54652 639 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 KIAA1841Q6NSI8 718 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 MLXIPLQ9NP71 852 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 ZSWIM5Q9P217 1185 aa14.03□□□□□ -0.16
USP6NL-205ENST00000609104 TAC1P20366 129 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 PDCLQ13371 301 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 PDIK1LQ8N165 341 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 APOBEC2Q9Y235 224 aaKnown RBP14.02□□□□□ -0.16
USP6NL-205ENST00000609104 MAGEA9P43362 315 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 PPP1R2P3Q6NXS1 205 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 EEPD1Q7L9B9 569 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 NLRP4Q96MN2 994 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 TTC25Q96NG3 672 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 CCDC90BQ9GZT6 254 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 GTSE1Q9NYZ3 720 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 KIF17Q9P2E2 1029 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 MAN1A2O60476 641 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.16
USP6NL-205ENST00000609104 SNAP25P60880 206 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 RFX8Q6ZV50 586 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 ERICH1Q86X53 443 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 IL17REQ8NFR9 667 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 AP5M1Q9H0R1 490 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 SLFN14P0C7P3 912 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 MXI1P50539 228 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 PASD1Q8IV76 773 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 WDR75Q8IWA0 830 aaKnown RBP14.02□□□□□ -0.16
USP6NL-205ENST00000609104 PIGSQ96S52 555 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 MID2Q9UJV3 735 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 LRFN2Q9ULH4 789 aa14.02□□□□□ -0.16
USP6NL-205ENST00000609104 WDR64B1ANS9 1081 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 ADD2P35612 726 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 PSMD2Q13200 908 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 TAF1BQ53T94 588 aaPredicted RBP14.02□□□□□ -0.17
USP6NL-205ENST00000609104 NDST4Q9H3R1 872 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 DBNLQ9UJU6 430 aaKnown RBP14.02□□□□□ -0.17
USP6NL-205ENST00000609104 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 TOGARAM2Q6ZUX3 1019 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 GSPT2Q8IYD1 628 aaKnown RBP14.02□□□□□ -0.17
USP6NL-205ENST00000609104 ANP32DO95626 131 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 MYL1P05976 194 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 ZFP69BQ9UJL9 534 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 DNMT1P26358 1616 aaKnown RBP14.02□□□□□ -0.17
USP6NL-205ENST00000609104 RWDD2BP57060 319 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 ANAPC7Q9UJX3 599 aa14.02□□□□□ -0.17
USP6NL-205ENST00000609104 EIF4E1BA6NMX2 242 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms