RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-240	ENST00000602263	SREBF1	P36956	1147 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	RCAN1	P53805	252 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	EXOSC10	Q01780	885 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	TMEM62	Q0P6H9	643 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	PLCB4	Q15147	1175 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	FAM160B1	Q5W0V3	765 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	NPAS4	Q8IUM7	802 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	CYP2W1	Q8TAV3	490 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	CLP1	Q92989	425 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	PPP2R3C	Q969Q6	453 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	ZBTB10	Q96DT7	871 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	PGBD1	Q96JS3	809 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	PLVAP	Q9BX97	442 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	AGO3	Q9H9G7	860 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	RC3H2	Q9HBD1	1191 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	AGO4	Q9HCK5	861 aa	Known RBP	11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	BARHL2	Q9NY43	387 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	PIEZO1	Q92508	2521 aa		11.92	□□□□□ -0.5
FARP1-240	ENST00000602263	IGSF9B	Q9UPX0	1349 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	KLF18	A0A0U1RQI7	1052 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CCDC196	A0A1B0GTZ2	297 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	SMIM35	A0A1B0GVV1	85 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	POTEB3	A0JP26	581 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	PI4K2B	G5E9Z4	385 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	DDX39A	O00148	427 aa	Known RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	MEIS1	O00470	390 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	GRM6	O15303	877 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CSPG5	O95196	566 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	AR	P10275	920 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	ALAD	P13716	330 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	KRT76	Q01546	638 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	ITGB3BP	Q13352	177 aa	Predicted RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	TYW1B	Q6NUM6	668 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	POTEB	Q6S5H4	581 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	NIPA1	Q7RTP0	329 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CMTR2	Q8IYT2	770 aa	Known RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	NME8	Q8N427	588 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	TRAPPC12	Q8WVT3	735 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.91	□□□□□ -0.5	4e-8	■■■□□ 17.1
FARP1-240	ENST00000602263	ZNF689	Q96CS4	500 aa	Predicted RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CELF4	Q9BZC1	486 aa	Known RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	CD320	Q9NPF0	282 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	PRKAG3	Q9UGI9	489 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	TCEAL9	Q9UHQ7	104 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	BRPF3	Q9ULD4	1205 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	LRFN2	Q9ULH4	789 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	PADI3	Q9ULW8	664 aa		11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.91	□□□□□ -0.5
FARP1-240	ENST00000602263	KDM3A	Q9Y4C1	1321 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	FAM86C2P	A6NEL3	165 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	HBP1	O60381	514 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	CDC45	O75419	566 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	ATG7	O95352	703 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	MMP1	P03956	469 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	LINC00271	P0C7V0	271 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	SCG2	P13521	617 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	METAP2	P50579	478 aa	Known RBP eCLIP	11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	FUT2	Q10981	343 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	COL19A1	Q14993	1142 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	CSPP1	Q1MSJ5	1256 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	TSGA10IP	Q3SY00	556 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	ODR4	Q5SWX8	454 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	MCTP2	Q6DN12	878 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	MIS18BP1	Q6P0N0	1132 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	PDXDC2P	Q6P474	469 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	MTHFD1L	Q6UB35	978 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	PLA2G4D	Q86XP0	818 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	ATP8B4	Q8TF62	1192 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	LINC01599	Q8WXQ3	324 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	PLXNA4	Q9HCM2	1894 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	RNF216	Q9NWF9	866 aa	Predicted RBP	11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	TMEM260	Q9NX78	707 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	GINS2	Q9Y248	185 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	MRPL42	Q9Y6G3	142 aa	Known RBP	11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	COL1A2	P08123	1366 aa		11.9	□□□□□ -0.5
FARP1-240	ENST00000602263	TRIO	O75962	3097 aa		11.9	□□□□□ -0.51
FARP1-240	ENST00000602263	IBSP	P21815	317 aa	Predicted RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	KLRC1	P26715	233 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	CLK2	P49760	499 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	SET	Q01105	290 aa	Predicted RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	NFX1	Q12986	1120 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	PFKFB3	Q16875	520 aa	Predicted RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	ADCK5	Q3MIX3	580 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	PAN2	Q504Q3	1202 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	NAALADL2	Q58DX5	795 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	ZNF484	Q5JVG2	852 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	JAKMIP3	Q5VZ66	844 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	CKAP2L	Q8IYA6	745 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	P2RX5	Q93086	422 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	POP1	Q99575	1024 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	ZNF577	Q9BSK1	485 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	UPF3B	Q9BZI7	483 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	IGFLR1	Q9H665	355 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	C6orf50	Q9HD87	102 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	ALG13	Q9NP73	1137 aa	Known RBP	11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	ZNF302	Q9NR11	478 aa		11.89	□□□□□ -0.51
FARP1-240	ENST00000602263	IGKV6D-21	A0A0A0MT36	114 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms