RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 KLRC1P26715 233 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 NONOQ15233 471 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 ME3Q16798 604 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 FBXO47Q5MNV8 452 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 KRT25Q7Z3Z0 450 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 TMCO2Q7Z6W1 182 aaPredicted RBP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 USP38Q8NB14 1042 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 WASF1Q92558 559 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 SLC5A5Q92911 643 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 TOP1MTQ969P6 601 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 MBOAT7Q96N66 472 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 IFIH1Q9BYX4 1025 aaKnown RBP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
CCDC9-203ENST00000596938 TCEAL9Q9UHQ7 104 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 COL1A2P08123 1366 aa11.91□□□□□ -0.5
CCDC9-203ENST00000596938 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-203ENST00000596938 WDR64B1ANS9 1081 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 PSMD10O75832 226 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 ARHGEF15O94989 841 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 IGFBP4P22692 258 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 SFNP31947 248 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 HTRA4P83105 476 aaPredicted RBP11.9□□□□□ -0.5
CCDC9-203ENST00000596938 LPIN1Q14693 890 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 ZBTB10Q96DT7 871 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 DISC1Q9NRI5 854 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 KCNJ14Q9UNX9 436 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 CDY2AQ9Y6F7 541 aa11.9□□□□□ -0.5
CCDC9-203ENST00000596938 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 TRANK1O15050 2925 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 LCHNA4D1U4 455 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 ZBTB42B2RXF5 422 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 M0QZ92 97 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 ENPP3O14638 875 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 GAS7O60861 476 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 GHRP10912 638 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
CCDC9-203ENST00000596938 JAK3P52333 1124 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 ERVK-21P61565 698 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 PPP4R3AQ6IN85 833 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 B3GNT9Q6UX72 402 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 TSHZ1Q6ZSZ6 1077 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 MYOCDQ8IZQ8 938 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 CELF4Q9BZC1 486 aaKnown RBP11.89□□□□□ -0.51
CCDC9-203ENST00000596938 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
CCDC9-203ENST00000596938 NRBP2Q9NSY0 501 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 SAMM50Q9Y512 469 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 SCN5AQ14524 2016 aa11.89□□□□□ -0.51
CCDC9-203ENST00000596938 CCDC194A0A1B0GVG4 234 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 LINC01553A4QN01 128 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 MAGEB2O15479 319 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TDP2O95551 362 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 INF2Q27J81 1249 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 FAM117BQ6P1L5 589 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TET1Q8NFU7 2136 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 ETNPPLQ8TBG4 499 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
CCDC9-203ENST00000596938 ARNTL2Q8WYA1 636 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TGS1Q96RS0 853 aaKnown RBP11.88□□□□□ -0.51
CCDC9-203ENST00000596938 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TEKT3Q9BXF9 490 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 FTHL17Q9BXU8 183 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 AGO3Q9H9G7 860 aaKnown RBP11.88□□□□□ -0.51
CCDC9-203ENST00000596938 CERS4Q9HA82 394 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 GJB4Q9NTQ9 266 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 LMCD1Q9NZU5 365 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
CCDC9-203ENST00000596938 CEP131Q9UPN4 1083 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 MTCH2Q9Y6C9 303 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 TANC1Q9C0D5 1861 aa11.88□□□□□ -0.51
CCDC9-203ENST00000596938 IGSF9BQ9UPX0 1349 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 VCANP13611 3396 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 TRIP12Q14669 1992 aaPredicted RBP11.87□□□□□ -0.51
CCDC9-203ENST00000596938 EPOPA6NHQ4 379 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 RBAK-RBAKDNI3L0D1 243 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 RFXAPO00287 272 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 DLL1O00548 723 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
CCDC9-203ENST00000596938 ZNF862O60290 1169 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 LARGE1O95461 756 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 C22orf31O95567 290 aa11.87□□□□□ -0.51
CCDC9-203ENST00000596938 GCFC2P16383 781 aaKnown RBP11.87□□□□□ -0.51
CCDC9-203ENST00000596938 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms