RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 P4HBP07237 508 aaKnown RBP28.96■■■□□ 2.23
TRIM28-204ENST00000594806 RFC2P35250 354 aa28.96■■■□□ 2.23
TRIM28-204ENST00000594806 PSMC5P62195 406 aa28.96■■■□□ 2.23
TRIM28-204ENST00000594806 RPAINQ86UA6 219 aa28.96■■■□□ 2.23
TRIM28-204ENST00000594806 DHX38Q92620 1227 aaKnown RBP28.96■■■□□ 2.23
TRIM28-204ENST00000594806 QARSP47897 775 aaKnown RBP28.95■■■□□ 2.22
TRIM28-204ENST00000594806 TRIM71Q2Q1W2 868 aaKnown RBP28.95■■■□□ 2.22
TRIM28-204ENST00000594806 NEK9Q8TD19 979 aa28.95■■■□□ 2.22
TRIM28-204ENST00000594806 WNT8AQ9H1J5 351 aa28.95■■■□□ 2.22
TRIM28-204ENST00000594806 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.95■■■□□ 2.22
TRIM28-204ENST00000594806 PCDHB6Q9Y5E3 794 aa28.95■■■□□ 2.22
TRIM28-204ENST00000594806 UMODL1Q5DID0 1318 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 STX6O43752 255 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 OATP04181 439 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 IQCF3P0C7M6 154 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 CKBP12277 381 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 SELPP16109 830 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 PRKCEQ02156 737 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 BECN1Q14457 450 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 MARCH8Q5T0T0 291 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 NCAPH2Q6IBW4 605 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 RSPH3Q86UC2 560 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 RPUSD2Q8IZ73 545 aaKnown RBP28.94■■■□□ 2.22
TRIM28-204ENST00000594806 C4orf32Q8N8J7 132 aa28.94■■■□□ 2.22
TRIM28-204ENST00000594806 COLQQ9Y215 455 aaPredicted RBP28.94■■■□□ 2.22
TRIM28-204ENST00000594806 ZNF862O60290 1169 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 PFKMP08237 780 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 CCL23P55773 120 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 PTGDRQ13258 359 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 TMEM266Q2M3C6 531 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 XKR3Q5GH77 459 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 PCDHA2Q9Y5H9 948 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 TANC1Q9C0D5 1861 aa28.93■■■□□ 2.22
TRIM28-204ENST00000594806 BMP15O95972 392 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 CSF2RAP15509 400 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 PRPHP41219 470 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 IGBP1P78318 339 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 UGCGQ16739 394 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 LRRC8DQ7L1W4 858 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 NIFKQ9BYG3 293 aaKnown RBP28.92■■■□□ 2.22
TRIM28-204ENST00000594806 ZSCAN16Q9H4T2 348 aaPredicted RBP28.92■■■□□ 2.22
TRIM28-204ENST00000594806 IL23AQ9NPF7 189 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 MTMR6Q9Y217 621 aa28.92■■■□□ 2.22
TRIM28-204ENST00000594806 MAGEB2O15479 319 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 THPOP40225 353 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 NBR1Q14596 966 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 MTHFD1LQ6UB35 978 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 C4orf19Q8IY42 314 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 RAB34Q9BZG1 259 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 ZSWIM4Q9H7M6 989 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 STK24Q9Y6E0 443 aa28.91■■■□□ 2.22
TRIM28-204ENST00000594806 SMIM35A0A1B0GVV1 85 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 FXR2P51116 673 aaKnown RBP eCLIP28.9■■■□□ 2.221e-13■■■■□ 21.8
TRIM28-204ENST00000594806 PDIA5Q14554 519 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 PSRC1Q6PGN9 363 aaPredicted RBP28.9■■■□□ 2.22
TRIM28-204ENST00000594806 TDHQ8IZJ6 230 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 NME8Q8N427 588 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 BANK1Q8NDB2 785 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 WNT8BQ93098 351 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 HSD17B14Q9BPX1 270 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 PPME1Q9Y570 386 aa28.9■■■□□ 2.22
TRIM28-204ENST00000594806 ZBTB42B2RXF5 422 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 KLRC1P26715 233 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 TECP42680 631 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 ZNF618Q5T7W0 954 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 FERMT3Q86UX7 667 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 ERMNQ8TAM6 284 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 SCLYQ96I15 445 aa28.89■■■□□ 2.22
TRIM28-204ENST00000594806 EIF2AK1Q9BQI3 630 aaKnown RBP28.89■■■□□ 2.22
TRIM28-204ENST00000594806 EVPLQ92817 2033 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 RSPH10B2B2RC85 870 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 STBD1O95210 358 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 LYPLA2O95372 231 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 RSPH10BP0C881 870 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 ATP2C1P98194 919 aaPredicted RBP28.88■■■□□ 2.21
TRIM28-204ENST00000594806 RESTQ13127 1097 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 FAM26DQ5JW98 314 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 ARL6IP4Q66PJ3 421 aaKnown RBP28.88■■■□□ 2.21
TRIM28-204ENST00000594806 TRAPPC12Q8WVT3 735 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 DYDC2Q96IM9 177 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 LXNQ9BS40 222 aa28.88■■■□□ 2.21
TRIM28-204ENST00000594806 SLITRK3O94933 977 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 TARBP2Q15633 366 aaKnown RBP28.87■■■□□ 2.21
TRIM28-204ENST00000594806 DTHD1Q6ZMT9 781 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 RUFY4Q6ZNE9 571 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 OTUD6AQ7L8S5 288 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 TRMT1LQ7Z2T5 733 aaKnown RBP28.87■■■□□ 2.21
TRIM28-204ENST00000594806 EXOC8Q8IYI6 725 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 RGL1Q9NZL6 768 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 PCDH10Q9P2E7 1040 aa28.87■■■□□ 2.21
TRIM28-204ENST00000594806 SEPT9Q9UHD8 586 aaPredicted RBP28.87■■■□□ 2.21
TRIM28-204ENST00000594806 SCN5AQ14524 2016 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 POTEMA6NI47 508 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 DDX11L8A8MPP1 907 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 C22orf31O95567 290 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 MUTP22033 750 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 IER5Q5VY09 327 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 TRAF7Q6Q0C0 670 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 ZNF710Q8N1W2 664 aa28.86■■■□□ 2.21
TRIM28-204ENST00000594806 DNAJB3Q8WWF6 145 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms