RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 PIGOQ8TEQ8 1089 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 KIF4AO95239 1232 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 TNFRSF8P28908 595 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 EXOC3L4Q17RC7 722 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 HYIQ5T013 277 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 CDC42EP5Q6NZY7 148 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
SAFB-205ENST00000588852 TSKSQ9UJT2 592 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
SAFB-205ENST00000588852 ERLIN2O94905 339 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 EEF2P13639 858 aaKnown RBP16.69■□□□□ 0.26
SAFB-205ENST00000588852 NR1D1P20393 614 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 SKOR1P84550 965 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 UAP1Q16222 522 aaPredicted RBP16.69■□□□□ 0.26
SAFB-205ENST00000588852 CERKQ8TCT0 537 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 TAF4BQ92750 862 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 RUSC1Q9BVN2 902 aa16.69■□□□□ 0.26
SAFB-205ENST00000588852 NUCKS1Q9H1E3 243 aaKnown RBP16.69■□□□□ 0.26
SAFB-205ENST00000588852 SMCHD1A6NHR9 2005 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 A0A087WUV0 522 aaPredicted RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 TULP1O00294 542 aaPredicted RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 GFPT2O94808 682 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 MARSP56192 900 aaKnown RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 COG2Q14746 738 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 CRY2Q49AN0 593 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 ZC2HC1CQ53FD0 456 aaPredicted RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 PPANQ9NQ55 473 aaKnown RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 GYS1P13807 737 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 TMOD1P28289 359 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 HSD17B3P37058 310 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 SF3A3Q12874 501 aaKnown RBP eCLIP16.68■□□□□ 0.261e-7■■■■■ 34.5
SAFB-205ENST00000588852 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
SAFB-205ENST00000588852 GBP6Q6ZN66 633 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 LRRC57Q8N9N7 239 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 TMEM59LQ9UK28 342 aa16.68■□□□□ 0.26
SAFB-205ENST00000588852 KDM3AQ9Y4C1 1321 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 DAPK3O43293 454 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 GCNT3O95395 438 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 GNA14O95837 355 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 XRCC5P13010 732 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 ABCB4P21439 1286 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 U2AF1L4Q8WU68 220 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 LUC7LQ9NQ29 371 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 NOC2LQ9Y3T9 749 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 MYO1FO00160 1098 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 EML1O00423 815 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 USP11P51784 963 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 HDLBPQ00341 1268 aaKnown RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 ETNPPLQ8TBG4 499 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 DPH5Q9H2P9 285 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 TAF1DQ9H5J8 278 aaPredicted RBP16.67■□□□□ 0.26
SAFB-205ENST00000588852 SIX2Q9NPC8 291 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 RNF14Q9UBS8 474 aa16.67■□□□□ 0.26
SAFB-205ENST00000588852 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 BTAF1O14981 1849 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 DDX3XO00571 662 aaKnown RBP eCLIP16.66■□□□□ 0.261e-21■■□□□ 12.6
SAFB-205ENST00000588852 TTI1O43156 1089 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 GDF11O95390 407 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 NMT1P30419 496 aaKnown RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 SEPT2Q15019 361 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 TPCN2Q8NHX9 752 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 TBC1D22AQ8WUA7 517 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 RUBCNQ92622 972 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 LENG9Q96B70 501 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 RBM17Q96I25 401 aaKnown RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 ATP6V1G3Q96LB4 118 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 ASTN1O14525 1302 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 FRMD3A2A2Y4 597 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 KRIT1O00522 736 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 GCFC2P16383 781 aaKnown RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 UBXN2AP68543 259 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 ITGB3BPQ13352 177 aaPredicted RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 EPHA7Q15375 998 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 GPATCH4Q5T3I0 446 aaKnown RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 DAAM2Q86T65 1068 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 SIAH1Q8IUQ4 282 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 SPICE1Q8N0Z3 855 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 SCFD2Q8WU76 684 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 DNM3Q9UQ16 869 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 AHDC1Q5TGY3 1603 aaPredicted RBP16.66■□□□□ 0.26
SAFB-205ENST00000588852 NHSQ6T4R5 1651 aa16.66■□□□□ 0.26
SAFB-205ENST00000588852 RGL2O15211 777 aa16.65■□□□□ 0.26
SAFB-205ENST00000588852 CHMP2AO43633 222 aa16.65■□□□□ 0.26
SAFB-205ENST00000588852 TOM1O60784 492 aa16.65■□□□□ 0.26
SAFB-205ENST00000588852 LRRN2O75325 713 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms