RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PTGS1P23219 599 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 GCLCP48506 637 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 HK2P52789 917 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 AMPD2Q01433 879 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 LAMB3Q13751 1172 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 BRD3Q15059 726 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 PLCB4Q15147 1175 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 TAF7Q15545 349 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC93Q567U6 631 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 GJC2Q5T442 439 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 ZSCAN25Q6NSZ9 544 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 CC2D1AQ6P1N0 951 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 ZFAND2BQ8WV99 257 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 RSRC1Q96IZ7 334 aaKnown RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 KIRREL1Q96J84 757 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 TMX3Q96JJ7 454 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 HHIPL1Q96JK4 782 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 TMOD4Q9NZQ9 345 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 AKT3Q9Y243 479 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 SUGT1Q9Y2Z0 365 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 PLB1Q6P1J6 1458 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ARHGAP35Q9NRY4 1499 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 CARMIL2Q6F5E8 1435 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 MAP3K5Q99683 1374 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 A6NNZ2 444 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 NOTOA8MTQ0 251 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 EBAG9O00559 213 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 LIN7AO14910 233 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 FSBPO95073 299 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 TUBBP07437 444 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 GLI1P08151 1106 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 FAM200BP0CF97 657 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 FERP16591 822 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 SLC8A1P32418 973 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 KCNJ6P48051 423 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 IFT88Q13099 833 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 RASGRF1Q13972 1273 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 SLC10A6Q3KNW5 377 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 TUBB8Q3ZCM7 444 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 LRRC23Q53EV4 343 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 RRP12Q5JTH9 1297 aaKnown RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 CWC27Q6UX04 472 aaKnown RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ARHGAP22Q7Z5H3 698 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 SLCO6A1Q86UG4 719 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 IQCF2Q8IXL9 164 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ADCY4Q8NFM4 1077 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 OR8K1Q8NGG5 319 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 B4GALNT2Q8NHY0 566 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 MYLIPQ8WY64 445 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 KAT2BQ92831 832 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 COPS5Q92905 334 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 JAKMIP2Q96AA8 810 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ZDHHC15Q96MV8 337 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 FMNL2Q96PY5 1086 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ALS2CR12Q96Q35 445 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ZMYM5Q9UJ78 669 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 THRAP3Q9Y2W1 955 aaKnown RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 BACE2Q9Y5Z0 518 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 TOP2AP11388 1531 aaKnown RBP6.86□□□□□ -1.31
SMAD4-203ENST00000585448 CUX1P39880 1505 aa6.86□□□□□ -1.31
SMAD4-203ENST00000585448 GAPVD1Q14C86 1478 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 SHTN1A0MZ66 631 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 ERICH2A1L162 156 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 EME2A4GXA9 379 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-203ENST00000585448 MAP2K7O14733 419 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 FKTNO75072 461 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 CAVIN2O95810 425 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 SCG5P05408 212 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 MYL1P05976 194 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC192P0DO97 292 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 HARSP12081 509 aaKnown RBP6.85□□□□□ -1.31
SMAD4-203ENST00000585448 ARHGAP25P42331 645 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 MCM2P49736 904 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 ROR2Q01974 943 aaKnown RBP6.85□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC15Q0P6D6 951 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 KCNMB1Q16558 191 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC57Q2TAC2 916 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 TLDC1Q6P9B6 456 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 SLC30A9Q6PML9 568 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 B4GALNT4Q76KP1 1039 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 ZNF227Q86WZ6 799 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 MYOCDQ8IZQ8 938 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 GBP7Q8N8V2 638 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-203ENST00000585448 TMEM52Q8NDY8 209 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 ABHD4Q8TB40 342 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 PARD3BQ8TEW8 1205 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 LZICQ8WZA0 190 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 FAM168AQ92567 244 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 TBC1D5Q92609 795 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 HOOK2Q96ED9 719 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 RBM17Q96I25 401 aaKnown RBP6.85□□□□□ -1.31
SMAD4-203ENST00000585448 MCMBPQ9BTE3 642 aa6.85□□□□□ -1.31
SMAD4-203ENST00000585448 CDADC1Q9BWV3 514 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms