RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CDY2AQ9Y6F7 541 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 MSH4O15457 936 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 EIF5BO60841 1220 aaKnown RBP24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 CTDNEP1O95476 244 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 ATP4AP20648 1035 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 MRPS6P82932 125 aaKnown RBP24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 KRT76Q01546 638 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 CCDC85BQ15834 202 aaPredicted RBP24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 GALNT17Q6IS24 598 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 SMAP1Q8IYB5 467 aaPredicted RBP24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 FAM177A1Q8N128 213 aaPredicted RBP24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 APBB2Q92870 758 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 GJA10Q969M2 543 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 C22orf23Q9BZE7 217 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 GJB4Q9NTQ9 266 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 PCDHA2Q9Y5H9 948 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 STK36Q9NRP7 1315 aa24.3■■□□□ 1.48
PPP4R1-228ENST00000584074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 HBP1O60381 514 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 NEK4P51957 841 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 TMEM62Q0P6H9 643 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 ME3Q16798 604 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 MTHFD1LQ6UB35 978 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 PHF20Q9BVI0 1012 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 TCEAL9Q9UHQ7 104 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 PCDHA10Q9Y5I2 948 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 MAFBQ9Y5Q3 323 aaPredicted RBP24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 REV3LO60673 3130 aa24.29■■□□□ 1.48
PPP4R1-228ENST00000584074 LARGE1O95461 756 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 TDP2O95551 362 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 PSAPP07602 524 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 KLRC1P26715 233 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 FBXO47Q5MNV8 452 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 TRMT1LQ7Z2T5 733 aaKnown RBP24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 CKAP2LQ8IYA6 745 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 SLC5A5Q92911 643 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 SAMM50Q9Y512 469 aa24.28■■□□□ 1.48
PPP4R1-228ENST00000584074 CYP3A7-CYP3A51PA0A087WV96 503 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 SMIM35A0A1B0GVV1 85 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 ZBTB42B2RXF5 422 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 DLL1O00548 723 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 UPP2O95045 317 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 RPLP2P05387 115 aaKnown RBP24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 CYP3A7P24462 503 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 NONOQ15233 471 aaKnown RBP eCLIP24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 Q4G0T1 1027 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 IER5Q5VY09 327 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 TOP1MTQ969P6 601 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 RIT2Q99578 217 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 AGO3Q9H9G7 860 aaKnown RBP24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 PRDM6Q9NQX0 595 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 ORC3Q9UBD5 711 aaPredicted RBP24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 GABBR1Q9UBS5 961 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 INSL6Q9Y581 213 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 VCANP13611 3396 aa24.27■■□□□ 1.48
PPP4R1-228ENST00000584074 LINC01553A4QN01 128 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 WDR64B1ANS9 1081 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 CHMP2AO43633 222 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 GAS7O60861 476 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 HTRA4P83105 476 aaPredicted RBP24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 INF2Q27J81 1249 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 ZNF484Q5JVG2 852 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 LRCH2Q5VUJ6 765 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 KRT25Q7Z3Z0 450 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 MICALL1Q8N3F8 863 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 GTF3C6Q969F1 213 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 DISC1Q9NRI5 854 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 MTUS1Q9ULD2 1270 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 KAT6AQ92794 2004 aa24.26■■□□□ 1.47
PPP4R1-228ENST00000584074 FDPSP14324 419 aaKnown RBP24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 XBP1P17861 261 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 TSHZ1Q6ZSZ6 1077 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 OXER1Q8TDS5 423 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 BBXQ8WY36 941 aaPredicted RBP24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 MBOAT7Q96N66 472 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 UNC45AQ9H3U1 944 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 TRPV2Q9Y5S1 764 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 COL1A2P08123 1366 aa24.25■■□□□ 1.47
PPP4R1-228ENST00000584074 M0QZ92 97 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 PSMD10O75832 226 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 CD52P31358 61 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 KRT40Q6A162 431 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 KIAA0319LQ8IZA0 1049 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 NME8Q8N427 588 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 TEKT3Q9BXF9 490 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 CELF4Q9BZC1 486 aaKnown RBP24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 MTCH2Q9Y6C9 303 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 IGSF9BQ9UPX0 1349 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 SIP14410 1827 aa24.24■■□□□ 1.47
PPP4R1-228ENST00000584074 MICAL3Q7RTP6 2002 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 CCDC194A0A1B0GVG4 234 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 ENPP3O14638 875 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 ZNF862O60290 1169 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 POU3F3P20264 500 aaPredicted RBP24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 ERVK-21P61565 698 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 GRB10Q13322 594 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 LETM2Q2VYF4 491 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 MOXD1Q6UVY6 613 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 ETNPPLQ8TBG4 499 aa24.23■■□□□ 1.47
PPP4R1-228ENST00000584074 TGS1Q96RS0 853 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms