RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 HBP1O60381 514 aa21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 CXCL10P02778 98 aa21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 MCM2P49736 904 aa21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 SMAD3P84022 425 aaKnown RBP21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 SAFBQ15424 915 aaKnown RBP eCLIP21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 MIER3Q7Z3K6 550 aa21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 DNAJB3Q8WWF6 145 aa21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 NAP1L4Q99733 375 aaKnown RBP21.06■□□□□ 0.96
PPP4R1-215ENST00000580182 ZBTB42B2RXF5 422 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 KIF28PB7ZC32 967 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 EML1O00423 815 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 ZNF862O60290 1169 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 ATP2B1P20020 1258 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 SFNP31947 248 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 JAK3P52333 1124 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 TAF2Q6P1X5 1199 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 MTHFD1LQ6UB35 978 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 TNPO1Q92973 898 aaKnown RBP21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 FAM49AQ9H0Q0 323 aaPredicted RBP21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 VAV3Q9UKW4 847 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 WDR81Q562E7 1941 aa21.05■□□□□ 0.96
PPP4R1-215ENST00000580182 CAND2O75155 1236 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 PARNO95453 639 aaKnown RBP21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 CHRNA1P02708 482 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 ACTN1P12814 892 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 KLRC1P26715 233 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 PBX2P40425 430 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 FAM20AQ96MK3 541 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 MTIF3Q9H2K0 278 aaKnown RBP21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 FOXP1Q9H334 677 aaPredicted RBP21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 SLC4A7Q9Y6M7 1214 aa21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 MYH9P35579 1960 aaKnown RBP21.04■□□□□ 0.96
PPP4R1-215ENST00000580182 TBX3O15119 743 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 MARCH6O60337 910 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 SLC34A2O95436 690 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 GJB2P29033 226 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 PRKCEQ02156 737 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 MGAT3Q09327 533 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 ZNF484Q5JVG2 852 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 FAM26DQ5JW98 314 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 GPR153Q6NV75 609 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 CNKSR3Q6P9H4 555 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 RPAINQ86UA6 219 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 PCDHA2Q9Y5H9 948 aa21.03■□□□□ 0.96
PPP4R1-215ENST00000580182 COL1A2P08123 1366 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 OATP04181 439 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 TMEM62Q0P6H9 643 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 PPP2R5CQ13362 524 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 DEFB123Q8N688 67 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 BANK1Q8NDB2 785 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 DBF4BQ8NFT6 615 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 RDM1Q8NG50 284 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 FAM161BQ96MY7 647 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 PBX4Q9BYU1 374 aa21.02■□□□□ 0.96
PPP4R1-215ENST00000580182 SIP14410 1827 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 RABGGTBP53611 331 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 GNL2Q13823 731 aaKnown RBP21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 CALCRLQ16602 461 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 RSPH3Q86UC2 560 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 NOSTRINQ8IVI9 506 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 TMEM60Q9H2L4 133 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 CDY2AQ9Y6F7 541 aa21.01■□□□□ 0.95
PPP4R1-215ENST00000580182 SMIM35A0A1B0GVV1 85 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 TMEM150BA6NC51 233 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 NEMFO60524 1076 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 BAIAP3O94812 1187 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 STBD1O95210 358 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 C22orf31O95567 290 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 ATP2A2P16615 1042 aaKnown RBP21■□□□□ 0.95
PPP4R1-215ENST00000580182 DNAJB2P25686 324 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 MCM7P33993 719 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 SPIRE1Q08AE8 756 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 PLEKHG4Q58EX7 1191 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 NCAPH2Q6IBW4 605 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 TMCO2Q7Z6W1 182 aaPredicted RBP21■□□□□ 0.95
PPP4R1-215ENST00000580182 SLFN12Q8IYM2 578 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 FAM167AQ96KS9 214 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 TTYH1Q9H313 450 aaPredicted RBP21■□□□□ 0.95
PPP4R1-215ENST00000580182 NRBP2Q9NSY0 501 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 SMC3Q9UQE7 1217 aa21■□□□□ 0.95
PPP4R1-215ENST00000580182 BAG4O95429 457 aaKnown RBP20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 GHRP10912 638 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 MYOGP15173 224 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 WDR5P61964 334 aaKnown RBP20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 DEFB103AP81534 67 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 MRPS6P82932 125 aaKnown RBP20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 NBR1Q14596 966 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 ZNF174Q15697 407 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 MTMR9Q96QG7 549 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 SH2D3AQ9BRG2 576 aa20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 WRAP73Q9P2S5 460 aaPredicted RBP20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 YBX2Q9Y2T7 364 aaKnown RBP20.99■□□□□ 0.95
PPP4R1-215ENST00000580182 GBF1Q92538 1859 aa20.98■□□□□ 0.95
PPP4R1-215ENST00000580182 PTPRSQ13332 1948 aa20.98■□□□□ 0.95
PPP4R1-215ENST00000580182 U2AF2P26368 475 aaKnown RBP eCLIP20.98■□□□□ 0.951e-7■■■■□ 23.2
PPP4R1-215ENST00000580182 TXKP42681 527 aa20.98■□□□□ 0.95
PPP4R1-215ENST00000580182 CUL4AQ13619 759 aa20.98■□□□□ 0.95
PPP4R1-215ENST00000580182 IKBKEQ14164 716 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms