RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 KCNA10Q16322 511 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 REXO1Q8N1G1 1221 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 SENP6Q9GZR1 1112 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 C11orf49Q9H6J7 331 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 PHF24Q9UPV7 400 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 PCDHGA11Q9Y5H2 935 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 UBIAD1Q9Y5Z9 338 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 GRIN2DO15399 1336 aa10.81□□□□□ -0.68
NPLOC4-219ENST00000576713 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 A0A1W2PQ45 241 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 A0A1W2PQY0 241 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 SPATA31C2B4DYI2 1134 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 GFRA3O60609 400 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 CDKL5O76039 1030 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ASGR1P07306 291 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ARP10275 920 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 CST5P28325 142 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ACLYP53396 1101 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 NLRP5P59047 1200 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ARHGAP4P98171 946 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 AP3B2Q13367 1082 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 FSCN1Q16658 493 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 CPLX2Q6PUV4 134 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 CXCL17Q6UXB2 119 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 BLIDQ8IZY5 108 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 DAGLBQ8NCG7 672 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 OR6J1Q8NGC5 347 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 AFG1LQ8WV93 481 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 TNFRSF25Q93038 417 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ZSCAN31Q96LW9 406 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 ZFAND3Q9H8U3 227 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 C6orf50Q9HD87 102 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 MRVI1Q9Y6F6 885 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 DOCK5Q9H7D0 1870 aa10.8□□□□□ -0.68
NPLOC4-219ENST00000576713 KCNA2P16389 499 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 ICAM3P32942 547 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 ATP1A2P50993 1020 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 PSMC6P62333 389 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 ITGB3BPQ13352 177 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 TTLL4Q14679 1199 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 HSDL1Q3SXM5 330 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 CRTC2Q53ET0 693 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 NECAB2Q7Z6G3 386 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 RNF180Q86T96 592 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 ARRDC4Q8NCT1 418 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 CCDC148Q8NFR7 591 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 GJA10Q969M2 543 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 LENG9Q96B70 501 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 MXRA8Q9BRK3 442 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 JADE2Q9NQC1 790 aa10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 SH2B1Q9NRF2 756 aaPredicted RBP10.79□□□□□ -0.68
NPLOC4-219ENST00000576713 FAM187AA6NFU0 413 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 KBTBD13C9JR72 458 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 TDP2O95551 362 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 GGPS1O95749 300 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 FOSP01100 380 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 MMP3P08254 477 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 GNA11P29992 359 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 CBLBQ13191 982 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 PTK7Q13308 1070 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 CELF3Q5SZQ8 465 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 KRT40Q6A162 431 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 TBCKQ8TEA7 893 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 CCDC12Q8WUD4 166 aaPredicted RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 MPHOSPH6Q99547 160 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 LLPHQ9BRT6 129 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 KCNH7Q9NS40 1196 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 DNAAF2Q9NVR5 837 aaKnown RBP10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 Q9Y3F1 56 aa10.78□□□□□ -0.68
NPLOC4-219ENST00000576713 BTBD18B2RXH4 712 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 B4DLN1 442 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 MEIS1O00470 390 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 NRG2O14511 850 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 FIBPO43427 364 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 GH1P01241 217 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 MMP1P03956 469 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 CYP3A4P08684 503 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 MTMR1Q13613 665 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 CUL4AQ13619 759 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 SNX17Q15036 470 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 INF2Q27J81 1249 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 TRIM60Q495X7 471 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 CEP55Q53EZ4 464 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 XRRA1Q6P2D8 792 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 SLC39A5Q6ZMH5 540 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 Q6ZVU0 165 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 DHX37Q8IY37 1157 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 KAT2BQ92831 832 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 GPRASP2Q96D09 838 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 TSEN34Q9BSV6 310 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 HTATIP2Q9BUP3 242 aa10.77□□□□□ -0.69
NPLOC4-219ENST00000576713 AP5M1Q9H0R1 490 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms