RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 ATP5F1P24539 256 aaPredicted RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 DNAJB1P25685 340 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TARSP26639 723 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 MZF1P28698 734 aaPredicted RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 GCKP35557 465 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 GRK6P43250 576 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ABCG1P45844 678 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 IREB2P48200 963 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 MAPKAPK2P49137 400 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TKTL1P51854 596 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 MRPL12P52815 198 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 AP3M2P53677 418 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 AK2P54819 239 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CDC16Q13042 620 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TRIM32Q13049 653 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 USP4Q13107 963 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 PRKG1Q13976 671 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 GBX1Q14549 363 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 GRM3Q14832 879 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 MAPRE2Q15555 327 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 SNCBQ16143 134 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ZNF423Q2M1K9 1284 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 FBXO43Q4G163 708 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TWF2Q6IBS0 349 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 LRSAM1Q6UWE0 723 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 B3GNT6Q6ZMB0 384 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CEP128Q6ZU80 1094 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 FAM47EQ6ZV65 393 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 GALNT7Q86SF2 657 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ZNF598Q86UK7 904 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 LUZP1Q86V48 1076 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 SLC41A1Q8IVJ1 513 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 PLEKHM2Q8IWE5 1019 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TPH2Q8IWU9 490 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TRMT2AQ8IZ69 625 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CCDC33Q8N5R6 958 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 SYT2Q8N9I0 419 aaPredicted RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 OR6P1Q8NGX9 317 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ADAMTS18Q8TE60 1221 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CASP10Q92851 521 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 PPP2R3CQ969Q6 453 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 NCLNQ969V3 563 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 OTUD5Q96G74 571 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 SNF8Q96H20 258 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CRELD1Q96HD1 420 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ART5Q96L15 291 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 HS6ST2Q96MM7 605 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TTC25Q96NG3 672 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 PIGSQ96S52 555 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 INTS2Q9H0H0 1204 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 NT5C3AQ9H0P0 336 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 EMILIN3Q9NT22 766 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 EXTL2Q9UBQ6 330 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CHORDC1Q9UHD1 332 aaPredicted RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 SCAF8Q9UPN6 1271 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 EEA1Q15075 1411 aa6.48□□□□□ -1.37
HMGN2P47-201ENST00000559378 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 EME2A4GXA9 379 aaPredicted RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 IKBKBO14920 756 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 POLR2DO15514 142 aaKnown RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 ASAP2O43150 1006 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 NDUFB5O43674 189 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 SPOPO43791 374 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 MAFKO60675 156 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 TRIM16O95361 564 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 UBL4AP11441 157 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 HPGDP15428 266 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 CSF2RAP15509 400 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 NPTX2P47972 431 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 CLNS1AP54105 237 aaKnown RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 ATXN1P54253 815 aaKnown RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 PMS2P54278 862 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 TGFB2P61812 414 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 BEX3Q00994 111 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 EHHADHQ08426 723 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 NCBP1Q09161 790 aaKnown RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 CETN1Q12798 172 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 PTGDRQ13258 359 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 MXD4Q14582 209 aaPredicted RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 QPCTQ16769 361 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 LETM2Q2VYF4 491 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 FUT11Q495W5 492 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 MINDY4Q4G0A6 757 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 NDUFAF5Q5TEU4 345 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 SLC6A19Q695T7 634 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 GPR139Q6DWJ6 353 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 DPY19L2Q6NUT2 758 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 ARHGAP11AQ6P4F7 1023 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 DNAJB7Q7Z6W7 309 aaPredicted RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 RNF180Q86T96 592 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 PACS2Q86VP3 889 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 CAND1Q86VP6 1230 aaKnown RBP6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 NKAIN4Q8IVV8 208 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 XXYLT1Q8NBI6 393 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 GDAP1Q8TB36 358 aa6.47□□□□□ -1.37
HMGN2P47-201ENST00000559378 GPT2Q8TD30 523 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms