RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 TRIM43Q96BQ3 446 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-228ENST00000557033 GPRASP2Q96D09 838 aa11.4□□□□□ -0.58
HNRNPC-228ENST00000557033 PDGFCQ9NRA1 345 aa11.4□□□□□ -0.58
HNRNPC-228ENST00000557033 FAM8A1Q9UBU6 413 aa11.4□□□□□ -0.58
HNRNPC-228ENST00000557033 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 E7EWF7 191 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 ARVCFO00192 962 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 SOX1O00570 391 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 IFIT3O14879 490 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 MICAL2O94851 1124 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 NR3C2P08235 984 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 EDNRBP24530 442 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 FAAP100Q0VG06 881 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 TRAF1Q13077 416 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 USH1GQ495M9 461 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 DUSP28Q4G0W2 176 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 SLC30A10Q6XR72 485 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 TLK2Q86UE8 772 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 FBXO11Q86XK2 927 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 SAMD3Q8N6K7 520 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 RASGRP4Q8TDF6 673 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 BADQ92934 168 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 MTA3Q9BTC8 594 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 CPVLQ9H3G5 476 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 JMJD4Q9H9V9 463 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 MAP3K20Q9NYL2 800 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 RANBP2P49792 3224 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-228ENST00000557033 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 A0A0U1RQG5 324 aaPredicted RBP11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 NKRFO15226 690 aaKnown RBP eCLIP11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 DHX16O60231 1041 aaKnown RBP11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 TNFRSF21O75509 655 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 ADH1AP07327 375 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 RAG1P15918 1043 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 IRS1P35568 1242 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 PTPN5P54829 565 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 QRICH1Q2TAL8 776 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 MTMR8Q96EF0 704 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 AMNQ9BXJ7 453 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 WDR11Q9BZH6 1224 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 NEUROD4Q9HD90 331 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 MAD2L2Q9UI95 211 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 LCTP09848 1927 aa11.38□□□□□ -0.59
HNRNPC-228ENST00000557033 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 TIMP1P01033 207 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 BEX3Q00994 111 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 GRM4Q14833 912 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 WTAPQ15007 396 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 TMTC2Q8N394 836 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 SCFD2Q8WU76 684 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 MAP3K14Q99558 947 aa11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 NIFKQ9BYG3 293 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 FOXD3Q9UJU5 478 aaPredicted RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 DDX49Q9Y6V7 483 aaKnown RBP11.37□□□□□ -0.59
HNRNPC-228ENST00000557033 LRRC37A2A6NM11 1700 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 ZBTB5O15062 677 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 KPNA6O60684 536 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 CD4P01730 458 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 USP17L7P0C7H9 530 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 ITGB8P26012 769 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 HSD3B2P26439 372 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 CPT1AP50416 773 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 GHRHRQ02643 423 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 TROAPQ12815 778 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 ITGA7Q13683 1181 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 SHHQ15465 462 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 BRDTQ58F21 947 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 BMP2KLQ5H9B9 411 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 TMEM67Q5HYA8 995 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 CXCL17Q6UXB2 119 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 FAM126BQ8IXS8 530 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 SYTL5Q8TDW5 730 aaPredicted RBP11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 TBC1D5Q92609 795 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 RIOX1Q9H6W3 641 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 DMGDHQ9UI17 866 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 TBX21Q9UL17 535 aa11.36□□□□□ -0.59
HNRNPC-228ENST00000557033 MYH6P13533 1939 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 EIF3JO75822 258 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 SMARCA1P28370 1054 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 MCM5P33992 734 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TXLNAP40222 546 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms