RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PROM2Q8N271 834 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 LRRC43Q8N309 656 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 DRC3Q9H069 523 aa17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 UBE2TQ9NPD8 197 aaPredicted RBP17.02■□□□□ 0.32
RBFOX1-212ENST00000550418 SETBP1Q9Y6X0 1596 aa17.02■□□□□ 0.31
RBFOX1-212ENST00000550418 H0YIN7 160 aa17.02■□□□□ 0.31
RBFOX1-212ENST00000550418 PNKPQ96T60 521 aa17.02■□□□□ 0.31
RBFOX1-212ENST00000550418 EFHD1Q9BUP0 239 aa17.02■□□□□ 0.31
RBFOX1-212ENST00000550418 SLC40A1Q9NP59 571 aa17.02■□□□□ 0.31
RBFOX1-212ENST00000550418 FAM107AO95990 144 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 EXOSC10Q01780 885 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 STOX1Q6ZVD7 989 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 PIH1D3Q9NQM4 214 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 GJA3Q9Y6H8 435 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 HAUS5O94927 633 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 FOSP01100 380 aaPredicted RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 GARSP41250 739 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 CENPUQ71F23 418 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 STAG2Q8N3U4 1231 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 ENGASEQ8NFI3 743 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 BEGAINQ9BUH8 593 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 PPARGC1AQ9UBK2 798 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 PSMD14O00487 310 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 GRAMD1AQ96CP6 724 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 FAM187AA6NFU0 413 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 IPO5O00410 1097 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 DYNLL1P63167 89 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 ZYXQ15942 572 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 CYFIP2Q96F07 1278 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 SGSM3Q96HU1 749 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 SCYL1Q96KG9 808 aa17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 NOC2LQ9Y3T9 749 aaKnown RBP17.01■□□□□ 0.31
RBFOX1-212ENST00000550418 NEXMIFQ5QGS0 1516 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 MGEA5O60502 916 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 BBS9Q3SYG4 887 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 RNF34Q969K3 372 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 AMACRQ9UHK6 382 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 LRRC7Q96NW7 1537 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 STXBP3O00186 592 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 LIG4P49917 911 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 ATG16L1Q676U5 607 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 LRIG3Q6UXM1 1119 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 CPXCR1Q8N123 301 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 PYROXD1Q8WU10 500 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 ZIM3Q96PE6 472 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 TRIM10Q9UDY6 481 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
RBFOX1-212ENST00000550418 PLCB4Q15147 1175 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
RBFOX1-212ENST00000550418 HIPK4Q8NE63 616 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 MRPL47Q9HD33 250 aaKnown RBP17■□□□□ 0.31
RBFOX1-212ENST00000550418 FBXO2Q9UK22 296 aaPredicted RBP17■□□□□ 0.31
RBFOX1-212ENST00000550418 GOLGA8QA0A0J9YX86 632 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 GOLGA8OA6NCC3 632 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 GOLGA8NF8WBI6 632 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 TTC4O95801 387 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 TMOD1P28289 359 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 XKR9Q5GH70 373 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 FBXO11Q86XK2 927 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 PDIK1LQ8N165 341 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 TRAIPQ9BWF2 469 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 EDEM3Q9BZQ6 932 aa17■□□□□ 0.31
RBFOX1-212ENST00000550418 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 TOM1L1O75674 476 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 IGKV5-2P06315 115 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 DEUP1Q05D60 604 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 SAYSD1Q9NPB0 183 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 ARL2BPQ9Y2Y0 163 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 BASP1P80723 227 aaKnown RBP16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 SEMA3FQ13275 785 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 LY9Q9HBG7 655 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 IQANK1A0A1B0GTG1 560 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 CHRNA3P32297 505 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 PDE6BP35913 854 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 SPATA21Q7Z572 469 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 MAP7D3Q8IWC1 876 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 DEPTORQ8TB45 409 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 STAMBPL1Q96FJ0 436 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 OLFM3Q96PB7 478 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 PIGSQ96S52 555 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 SERPINI1Q99574 410 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 CD248Q9HCU0 757 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 MAP3K15Q6ZN16 1313 aa16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 CLTCQ00610 1675 aaKnown RBP16.99■□□□□ 0.31
RBFOX1-212ENST00000550418 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 APOEP02649 317 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 KRT1P04264 644 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 KLC1Q07866 573 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 ASPRV1Q53RT3 343 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 NSMFQ6X4W1 530 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 ANLNQ9NQW6 1124 aa16.98■□□□□ 0.31
RBFOX1-212ENST00000550418 TTLL3Q9Y4R7 772 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms