RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 PANK4Q9NVE7 773 aa16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 WRAP73Q9P2S5 460 aaPredicted RBP16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 ADAM21Q9UKJ8 722 aa16.9■□□□□ 0.3
CLPTM1-202ENST00000541297 LRRC41Q15345 812 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 RIT2Q99578 217 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 LZTFL1Q9NQ48 299 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 A0A0U1RQJ8 604 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 SOWAHDA6NJG2 315 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 DHX15O43143 795 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 CCND2P30279 289 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 COASYQ13057 564 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
CLPTM1-202ENST00000541297 CCDC151A5D8V7 595 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 SLC26A4O43511 780 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 TXNRD2Q9NNW7 524 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 NR1I3Q14994 352 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 MIER3Q7Z3K6 550 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 SYT2Q8N9I0 419 aaPredicted RBP16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 TUFT1Q9NNX1 390 aa16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 PUF60Q9UHX1 559 aaKnown RBP16.88■□□□□ 0.29
CLPTM1-202ENST00000541297 MAP2K7O14733 419 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 LMAN1P49257 510 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 TRMT1LQ7Z2T5 733 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 MB21D1Q8N884 522 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 CHST13Q8NET6 341 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 LXNQ9BS40 222 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 FGFBP2Q9BYJ0 223 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 TSPYL1Q9H0U9 437 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 SORBS3O60504 671 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 CCDC175P0C221 793 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 FSTL1Q12841 308 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 SEMA3FQ13275 785 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 ANKRD40Q6AI12 368 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 FASTKD5Q7L8L6 764 aaKnown RBP16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 RUSC1Q9BVN2 902 aa16.87■□□□□ 0.29
CLPTM1-202ENST00000541297 TEX33O43247 280 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 CNMDO75829 334 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 EHHADHQ08426 723 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 SNAPC2Q13487 334 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 BRD3Q15059 726 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 EPHA7Q15375 998 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 HERC4Q5GLZ8 1057 aaPredicted RBP16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 APTXQ7Z2E3 356 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 P2RX5Q93086 422 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 EXOC4Q96A65 974 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 REEP2Q9BRK0 252 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 ANKZF1Q9H8Y5 726 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 NMRK2Q9NPI5 230 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 ASTN1O14525 1302 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 AKR1B15C9JRZ8 316 aaPredicted RBP16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 RGS20O76081 388 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 EYA4O95677 639 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 CYP2C8P10632 490 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 Q3C1V9 767 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 TTI2Q6NXR4 508 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 RAD9BQ6WBX8 426 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 CPLX3Q8WVH0 158 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 LCMT1Q9UIC8 334 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 WDR81Q562E7 1941 aa16.86■□□□□ 0.29
CLPTM1-202ENST00000541297 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 CELF2O95319 508 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 ERCC3P19447 782 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 CCNE1P24864 410 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 GIT2Q14161 759 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 FAM26FQ5R3K3 315 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 SEMA6BQ9H3T3 888 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 RBPJLQ9UBG7 517 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 ADGRG1Q9Y653 693 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 KCNJ12Q14500 433 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 KRT31Q15323 416 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 CSGALNACT2Q8N6G5 542 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 PNKPQ96T60 521 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 TBC1D22BQ9NU19 505 aa16.85■□□□□ 0.29
CLPTM1-202ENST00000541297 MYH11P35749 1972 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms