RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PLEKP08567 350 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 EIF4A3P38919 411 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 CETN2P41208 172 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 MAGEA1P43355 309 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 FUT2Q10981 343 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 KRT79Q5XKE5 535 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PRR5LQ6MZQ0 368 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 TLDC1Q6P9B6 456 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 CYB5D1Q6P9G0 228 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 C6orf89Q6UWU4 347 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 VPS36Q86VN1 386 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ARMC2Q8NEN0 867 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 DHTKD1Q96HY7 919 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 ERGIC2Q96RQ1 377 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 TSPYL2Q9H2G4 693 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 DISC1Q9NRI5 854 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 GGT7Q9UJ14 662 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PLAAQ9Y263 795 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 SCN9AQ15858 1988 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PSME4Q14997 1843 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PCNTO95613 3336 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 POLRMTO00411 1230 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 RHOBTB3O94955 611 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 CCNE1P24864 410 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 SLC8A1P32418 973 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 RANBP1P43487 201 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 MRPL12P52815 198 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 IFFO1Q0D2I5 559 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ITGB3BPQ13352 177 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 CRYMQ14894 314 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ARL6IP4Q66PJ3 421 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 C15orf52Q6ZUT6 534 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 NSMCE1Q8WV22 266 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 P2RX5Q93086 422 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 AKT1S1Q96B36 256 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 NOX5Q96PH1 765 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 BAIAP2L1Q9UHR4 511 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PLAGL2Q9UPG8 496 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ZSCAN5CA6NGD5 496 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 MYL1P05976 194 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 PYGBP11216 843 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 TRADDQ15628 312 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 IL17AQ16552 155 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 QPCTQ16769 361 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 LRIG3Q6UXM1 1119 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 FMNL3Q8IVF7 1028 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 FUKQ8N0W3 1084 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ZNF784Q8NCA9 323 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 GIMAP8Q8ND71 665 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 MAGEC3Q8TD91 643 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 CASKIN2Q8WXE0 1202 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 EEF2KMTQ96G04 330 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 FAM163AQ96GL9 167 aaPredicted RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 DUSP9Q99956 384 aaKnown RBP5.7□□□□□ -1.5
PROM1-220ENST00000540805 TLR10Q9BXR5 811 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 TMBIM4Q9HC24 238 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 ARHGAP20Q9P2F6 1191 aa5.7□□□□□ -1.5
PROM1-220ENST00000540805 GMNCA6NCL1 334 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 HGSO14964 777 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 PJA2O43164 708 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 KLRC4O43908 158 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MYZAPP0CAP1 466 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CALRP27797 417 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 HNRNPH3P31942 346 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 TXKP42681 527 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MAGEA10P43363 369 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 RPS6KA3P51812 740 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 DYNLL1P63167 89 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 EN1Q05925 392 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 NPY5RQ15761 445 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ANKRD20A8PQ5CZ79 823 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CACNA2D3Q8IZS8 1091 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ITFG2Q969R8 447 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 TEKT1Q969V4 418 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MS4A14Q96JA4 679 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ARHGEF10LQ9HCE6 1279 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 SPATS2LQ9NUQ6 558 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 LNPEPQ9UIQ6 1025 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ABT1Q9ULW3 272 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.69□□□□□ -1.5
PROM1-220ENST00000540805 KIF13BQ9NQT8 1826 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ANKRD33BA6NCL7 494 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 BUB1O43683 1085 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 LCA5LO95447 670 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 GOLGA8HP0CJ92 632 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ALAS1P13196 640 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 HSPA9P38646 679 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 PPP1R2P41236 205 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 TNNC1P63316 161 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MECOMQ03112 1051 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 TRAF1Q13077 416 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MIIPQ5JXC2 388 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 C1QTNF12Q5T7M4 302 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 KLHDC7AQ5VTJ3 777 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 GADL1Q6ZQY3 521 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 STXBP4Q6ZWJ1 553 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ARMC9Q7Z3E5 817 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms