RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 GRIN2DO15399 1336 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 A0A1W2PPC1 479 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 GTPBP10A4D1E9 387 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 O00370 1275 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CETN3O15182 167 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 EVI5O60447 810 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 BAG3O95817 575 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 AGTP01019 485 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 LMNAP02545 664 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 LDHCP07864 332 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CYP7A1P22680 504 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CCND1P24385 295 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 MAN1A1P33908 653 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 MCM7P33993 719 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 EIF4A3P38919 411 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 USP11P51784 963 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 ATP11AP98196 1134 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 GUCY2DQ02846 1103 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 FUT2Q10981 343 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 TRAF1Q13077 416 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 IFT88Q13099 833 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 HLTFQ14527 1009 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD4-206ENST00000536999 NONOQ15233 471 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD4-206ENST00000536999 EDRF1Q3B7T1 1238 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 TDRD12Q587J7 1177 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 MEI1Q5TIA1 1274 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 LRCH2Q5VUJ6 765 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CC2D2BQ6DHV5 1058 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 TYW1BQ6NUM6 668 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 PPP1R18Q6NYC8 613 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CYB5D1Q6P9G0 228 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 PIK3AP1Q6ZUJ8 805 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 STXBP4Q6ZWJ1 553 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 RRAGAQ7L523 313 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 NLRP10Q86W26 655 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 IRF2BP1Q8IU81 584 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 SLF2Q8IX21 1173 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CCDC65Q8IXS2 484 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 ENAHQ8N8S7 591 aaPredicted RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 MAB21L3Q8N8X9 362 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 USP38Q8NB14 1042 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 ARMC2Q8NEN0 867 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 MAIP1Q8WWC4 291 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 IFT81Q8WYA0 676 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 MIEF2Q96C03 454 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CYFIP2Q96F07 1278 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 ZNF594Q96JF6 807 aaPredicted RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.35□□□□□ -1.392e-10■■□□□ 13.1
CHD4-206ENST00000536999 TMEM109Q9BVC6 243 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 ZBTB3Q9H5J0 574 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 CCDC134Q9H6E4 229 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 PPCSQ9HAB8 311 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 PIH1D3Q9NQM4 214 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 GJB4Q9NTQ9 266 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 SPATS2LQ9NUQ6 558 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 BARHL2Q9NY43 387 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 NOP53Q9NZM5 478 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 VPS54Q9P1Q0 977 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 SUCLA2Q9P2R7 463 aaPredicted RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 SEC63Q9UGP8 760 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 RAPGEFL1Q9UHV5 662 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 MCM8Q9UJA3 840 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 COL4A3BPQ9Y5P4 624 aa6.35□□□□□ -1.39
CHD4-206ENST00000536999 RBBP6Q7Z6E9 1792 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
CHD4-206ENST00000536999 HTTP42858 3142 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 DDX60Q8IY21 1712 aaKnown RBP6.34□□□□□ -1.39
CHD4-206ENST00000536999 PFASO15067 1338 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 LOC102724159A0A0B4J2E5 919 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 TSPY2A6NKD2 308 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 MINDY4BA8MYZ0 360 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 MIF4GDA9UHW6 222 aaKnown RBP6.34□□□□□ -1.39
CHD4-206ENST00000536999 MGRN1O60291 552 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 DTNBO60941 627 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 SUN1O94901 812 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 KIF4AO95239 1232 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 NUDT17P0C025 328 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 NEFHP12036 1026 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 PLCG2P16885 1265 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 RXRAP19793 462 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 GUCY1A2P33402 732 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 LACTBP83111 547 aaPredicted RBP6.34□□□□□ -1.39
CHD4-206ENST00000536999 CAV1Q03135 178 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 RNASELQ05823 741 aaKnown RBP6.34□□□□□ -1.39
CHD4-206ENST00000536999 CXCL9Q07325 125 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 C2orf54Q08AI8 447 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 KLHL30Q0D2K2 578 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 SREBF2Q12772 1141 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 CETN1Q12798 172 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 NR1H3Q13133 447 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 TNIP1Q15025 636 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 PWP2Q15269 919 aaKnown RBP6.34□□□□□ -1.39
CHD4-206ENST00000536999 ASIC2Q16515 512 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 AOC3Q16853 763 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 GRIPAP1Q4V328 841 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 NAALADL2Q58DX5 795 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 SMYD5Q6GMV2 418 aa6.34□□□□□ -1.39
CHD4-206ENST00000536999 PDXDC1Q6P996 788 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms