RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CCDC105Q8IYK2 499 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 COLGALT1Q8NBJ5 622 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 MTMR8Q96EF0 704 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 GPATCH3Q96I76 525 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 INPP4AQ96PE3 977 aaPredicted RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 PCYT2Q99447 389 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 USP26Q9BXU7 913 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 CWH43Q9H720 699 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 CDHR5Q9HBB8 845 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 AAASQ9NRG9 546 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 RNF19AQ9NV58 838 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 TYW1Q9NV66 732 aaKnown RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 TMEM260Q9NX78 707 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 TUBE1Q9UJT0 475 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 PADI3Q9ULW8 664 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 COL4A3Q01955 1670 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 ATRXP46100 2492 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 FRMPD4Q14CM0 1322 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 TTC41PQ6P2S7 1318 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 NRCAMQ92823 1304 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 MBLAC1A4D2B0 266 aaPredicted RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 B4E1Z4 1266 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 CCER2I3L3R5 266 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 NARSO43776 548 aaKnown RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 PARP1P09874 1014 aaKnown RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 FGFR1P11362 822 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 AOC1P19801 751 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 TCF7P36402 384 aaPredicted RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 CLCN5P51795 746 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 ASPRV1Q53RT3 343 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 RARS2Q5T160 578 aaKnown RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 TAF2Q6P1X5 1199 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 KCNV1Q6PIU1 500 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 LRRC55Q6ZSA7 311 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 MFSD6Q6ZSS7 791 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 DGKHQ86XP1 1220 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 HOMER1Q86YM7 354 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 UBALD2Q8IYN6 164 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 THNSL1Q8IYQ7 743 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 DTWD2Q8NBA8 298 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 KCNG4Q8TDN1 519 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 TMEM40Q8WWA1 233 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 PIGSQ96S52 555 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 CDCA3Q99618 268 aaPredicted RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 TCF25Q9BQ70 676 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 AMNQ9BXJ7 453 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 MAF1Q9H063 256 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 MFSD1Q9H3U5 465 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 ERVK-5Q9HDB9 667 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 PKD2L1Q9P0L9 805 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 ZNF215Q9UL58 517 aaPredicted RBP6.05□□□□□ -1.44
CHD4-205ENST00000536301 PCDHA1Q9Y5I3 950 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 TRPV2Q9Y5S1 764 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 HCFC2Q9Y5Z7 792 aa6.05□□□□□ -1.44
CHD4-205ENST00000536301 IGSF9BQ9UPX0 1349 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 TRIM6-TRIM34B2RNG4 842 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 C9IYK1 514 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 GCOM1H8Y6P7 765 aaPredicted RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 ZBTB5O15062 677 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 FIBPO43427 364 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 CYTH3O43739 400 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 CLASP2O75122 1294 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 LMNAP02545 664 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 POLR2MP0CAP2 368 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 STAG3L1P0CL83 205 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 INSRRP14616 1297 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 KCNA2P16389 499 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 EPCAMP16422 314 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 SARSP49591 514 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 UBE3AQ05086 875 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 NFX1Q12986 1120 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 PAK2Q13177 524 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 NEDD9Q14511 834 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 PUM1Q14671 1186 aaKnown RBP eCLIP6.04□□□□□ -1.441e-6■■□□□ 11.8
CHD4-205ENST00000536301 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 CYP2W1Q8TAV3 490 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 PIBF1Q8WXW3 757 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 AUTS2Q8WXX7 1259 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 MRPS27Q92552 414 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 PPP1R16BQ96T49 567 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 ADAM7Q9H2U9 754 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 KAT14Q9H8E8 782 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 SENP2Q9HC62 589 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 ENTPD7Q9NQZ7 604 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 HELLSQ9NRZ9 838 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 DLL3Q9NYJ7 618 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 ZSWIM5Q9P217 1185 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 MAD2L2Q9UI95 211 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 LRFN2Q9ULH4 789 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 NOC2LQ9Y3T9 749 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 NR2E1Q9Y466 385 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 PCDHB12Q9Y5F1 795 aa6.04□□□□□ -1.44
CHD4-205ENST00000536301 FASNP49327 2511 aaKnown RBP6.04□□□□□ -1.44
CHD4-205ENST00000536301 SDK1Q7Z5N4 2213 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
CHD4-205ENST00000536301 FAM208BQ5VWN6 2430 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms