RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 IRF2BP1Q8IU81 584 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SCG3Q8WXD2 468 aaKnown RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SNX27Q96L92 541 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 SIKE1Q9BRV8 207 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 INTS9Q9NV88 658 aaKnown RBP8.45□□□□□ -1.06
PTPRK-219ENST00000531050 PRKAG3Q9UGI9 489 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 ITGB1BP2Q9UKP3 347 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 PCDHA13Q9Y5I0 950 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 HEY1Q9Y5J3 304 aa8.45□□□□□ -1.06
PTPRK-219ENST00000531050 LTN1O94822 1766 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 GOLGA8BA8MQT2 603 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ZPR1O75312 459 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ZCCHC18P0CG32 403 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 TROVE2P10155 538 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 IFNAR2P48551 515 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 TRPC1P48995 793 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ADARP55265 1226 aaKnown RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 GEMIN4P57678 1058 aaKnown RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 KPNB1Q14974 876 aaKnown RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 KLC3Q6P597 504 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 GET4Q7L5D6 327 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 HAUS1Q96CS2 278 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 INPP4AQ96PE3 977 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 IFIH1Q9BYX4 1025 aaKnown RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 DENND2DQ9H6A0 471 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 FGFR1OP2Q9NVK5 253 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 STK32BQ9NY57 414 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 STOML1Q9UBI4 398 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 HESX1Q9UBX0 185 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ARL2BPQ9Y2Y0 163 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 MYH7BA7E2Y1 1941 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 A0A087X0B3 334 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 KLF18A0A0U1RQI7 1052 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 GRID2IPA4D2P6 1211 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 AKR1B10O60218 316 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ASMTLO95671 621 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 PLEKP08567 350 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 PDGFRBP09619 1106 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 HOXC9P31274 260 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 AFMP43652 599 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CDK7P50613 346 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 EMP3P54852 163 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 MGAT5Q09328 741 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ITGA7Q13683 1181 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 MAP7Q14244 749 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 SPA17Q15506 151 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 HLFQ16534 295 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CERKLQ49MI3 558 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 SNX30Q5VWJ9 437 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 PHLDB3Q6NSJ2 640 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 SLC2A7Q6PXP3 512 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 DAAM2Q86T65 1068 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 KLHL7Q8IXQ5 586 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CCDC65Q8IXS2 484 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 EXOC8Q8IYI6 725 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 LRRC8CQ8TDW0 803 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 LPIN2Q92539 896 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 PAGE5Q96GU1 130 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CENPKQ9BS16 269 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 ALG1Q9BT22 464 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 POLR3CQ9BUI4 534 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 DHX36Q9H2U1 1008 aaKnown RBP8.44□□□□□ -1.06
PTPRK-219ENST00000531050 RWDD2AQ9UIY3 292 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 TMEM59LQ9UK28 342 aa8.44□□□□□ -1.06
PTPRK-219ENST00000531050 CACNA1FO60840 1977 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 SERPINB3P29508 390 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 IARSP41252 1262 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 TOB1P50616 345 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 GALK1P51570 392 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 NLRP6P59044 892 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 BCL2A1Q16548 175 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 GSTA3Q16772 222 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 FAM47EQ6ZV65 393 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 MAP7D3Q8IWC1 876 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 THEMISQ8N1K5 641 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PDCD7Q8N8D1 485 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 CFAP61Q8NHU2 1237 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 MTMR8Q96EF0 704 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 MPP4Q96JB8 637 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 DNAJC1Q96KC8 554 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 TUBGCP5Q96RT8 1024 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 DCLRE1BQ9H816 532 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 MYO5AQ9Y4I1 1855 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 MED1Q15648 1581 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 CPLX1O14810 134 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 WDR46O15213 610 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 BIRC5O15392 142 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PABPC4LP0CB38 370 aaKnown RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 PORP16435 677 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 KCNA6P17658 529 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 KLK7P49862 253 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 IFI35P80217 286 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-219ENST00000531050 GIT2Q14161 759 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 WDR72Q3MJ13 1102 aa8.43□□□□□ -1.06
PTPRK-219ENST00000531050 CCDC152Q4G0S7 254 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms