RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HOXC8P31273 242 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 QARSP47897 775 aaKnown RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 DNM2P50570 870 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF200P98182 395 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 RBL2Q08999 1139 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 TBC1D8BQ0IIM8 1120 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 EPHA7Q15375 998 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 XKR3Q5GH77 459 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 IER5Q5VY09 327 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 HAUS3Q68CZ6 603 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 OTUD6AQ7L8S5 288 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 TRMT1LQ7Z2T5 733 aaKnown RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 DEFB128Q7Z7B8 93 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 EXOC8Q8IYI6 725 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF710Q8N1W2 664 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 METTL13Q8N6R0 699 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 GJA10Q969M2 543 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 SCLYQ96I15 445 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 SCLT1Q96NL6 688 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 PCYT2Q99447 389 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 JPH2Q9BR39 696 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 FAM49AQ9H0Q0 323 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZSWIM4Q9H7M6 989 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 VAV3Q9UKW4 847 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 TELO2Q9Y4R8 837 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 MAFBQ9Y5Q3 323 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 CENPFP49454 3210 aa6.06□□□□□ -1.44
HMGB1P40-201ENST00000525121 UMODL1Q5DID0 1318 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 SMIM35A0A1B0GVV1 85 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 MBLAC1A4D2B0 266 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 DDX11L8A8MPP1 907 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 KIF28PB7ZC32 967 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 STX6O43752 255 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 EDIL3O43854 480 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 EFCAB14O75071 495 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 BAIAP3O94812 1187 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 SYT1P21579 422 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 ITGB8P26012 769 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 KLRC1P26715 233 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 KCNJ6P48051 423 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 POLGP54098 1239 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 MRPS6P82932 125 aaKnown RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 CYP4A11Q02928 519 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 PTGDRQ13258 359 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 MTERF2Q49AM1 385 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 HABP4Q5JVS0 413 aaKnown RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 ODR4Q5SWX8 454 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF618Q5T7W0 954 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 MTHFD1LQ6UB35 978 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 DTHD1Q6ZMT9 781 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 FERMT3Q86UX7 667 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 TPH2Q8IWU9 490 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 NME8Q8N427 588 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 TRAPPC12Q8WVT3 735 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 DNAJB3Q8WWF6 145 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 SLC7A3Q8WY07 619 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 SEPT8Q92599 483 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 DHX38Q92620 1227 aaKnown RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 HAS1Q92839 578 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 EIF2AK1Q9BQI3 630 aaKnown RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 LXNQ9BS40 222 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 WNT8AQ9H1J5 351 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZSCAN16Q9H4T2 348 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 DAXXQ9UER7 740 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 AKT3Q9Y243 479 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 PPME1Q9Y570 386 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 PCDHA2Q9Y5H9 948 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 SCN10AQ9Y5Y9 1956 aa6.05□□□□□ -1.44
HMGB1P40-201ENST00000525121 ALPK3Q96L96 1907 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 POTEMA6NI47 508 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 EML1O00423 815 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF862O60290 1169 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 C22orf31O95567 290 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 ACRP10323 421 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 YWHABP31946 246 aaKnown RBP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 RFC5P40937 340 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 PRPHP41219 470 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 TECP42680 631 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 FXR2P51116 673 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 ADAM17P78536 824 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 CDC42EP1Q00587 391 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 IKBKEQ14164 716 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 CTTNQ14247 550 aaKnown RBP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 NBR1Q14596 966 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 SHHQ15465 462 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 UGCGQ16739 394 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 TRIM71Q2Q1W2 868 aaKnown RBP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 XKR9Q5GH70 373 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 MARCH8Q5T0T0 291 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 KRT79Q5XKE5 535 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 ARL6IP4Q66PJ3 421 aaKnown RBP6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 CNKSR3Q6P9H4 555 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 B3GNT9Q6UX72 402 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 RUFY4Q6ZNE9 571 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 ZNF365Q70YC5 407 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 OTOP2Q7RTS6 562 aa6.04□□□□□ -1.44
HMGB1P40-201ENST00000525121 C4orf19Q8IY42 314 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms