RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	MTMR8	Q96EF0	704 aa		6.3	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ACSS2	Q9NR19	701 aa		6.3	□□□□□ -1.4
CTNNA1-222	ENST00000520400	UCKL1	Q9NWZ5	548 aa		6.3	□□□□□ -1.4
CTNNA1-222	ENST00000520400	TNKS	O95271	1327 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	TEX51	A0A1B0GUA7	166 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	PRAMEF22	A3QJZ6	481 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZNF839	A8K0R7	811 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ALG1L2	C9J202	215 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	FZD9	O00144	591 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	PLA2G1B	P04054	148 aa	Known RBP	6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	HERVK_113	P62684	666 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	PFKP	Q01813	784 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	TMEM62	Q0P6H9	643 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	MOGS	Q13724	837 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZBTB41	Q5SVQ8	909 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	PRAMEF18	Q5VWM3	479 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	IQSEC1	Q6DN90	963 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	UNQ6494/PRO21346	Q6UXR6	183 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	EP400NL	Q6ZTU2	488 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZNF610	Q8N9Z0	462 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	MZB1	Q8WU39	189 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	SMAD5	Q99717	465 aa	Known RBP	6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	TYW1	Q9NV66	732 aa	Known RBP	6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	C14orf119	Q9NWQ9	140 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	SIRT5	Q9NXA8	310 aa		6.29	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400		K7ESF4	209 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	H2AFY	O75367	372 aa	Known RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	NCAM1	P13591	858 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	HSP90B1	P14625	803 aa	Known RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	CPE	P16870	476 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	FNTB	P49356	437 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ITGA1	P56199	1179 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	RBM10	P98175	930 aa	Known RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	EXOSC10	Q01780	885 aa	Known RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ITK	Q08881	620 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	LRRC32	Q14392	662 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	MYBPC3	Q14896	1274 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	EPHA7	Q15375	998 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ABCB5	Q2M3G0	1257 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	MCTP1	Q6DN14	999 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	DTX3	Q8N9I9	347 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZSWIM3	Q96MP5	696 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ZDHHC5	Q9C0B5	715 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	PUS7L	Q9H0K6	701 aa	Known RBP	6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	POFUT1	Q9H488	388 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	NUB1	Q9Y5A7	615 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ADAMTS20	P59510	1910 aa		6.28	□□□□□ -1.4
CTNNA1-222	ENST00000520400	ETV2	O00321	342 aa	Predicted RBP	6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	N4BP3	O15049	544 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	CYP17A1	P05093	508 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	CLEC2L	P0C7M8	214 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	RGS3	P49796	1198 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	DLG4	P78352	724 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	OCRL	Q01968	901 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SSPN	Q14714	243 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SKIDA1	Q1XH10	827 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	GPR158	Q5T848	1215 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SYDE2	Q5VT97	1194 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	B3GNT8	Q7Z7M8	397 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	C11orf74	Q86VG3	221 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	RASSF3	Q86WH2	238 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	LMBR1	Q8WVP7	490 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	YIPF4	Q9BSR8	244 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	MSRA	Q9UJ68	235 aa		6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	G3BP2	Q9UN86	482 aa	Known RBP	6.27	□□□□□ -1.41
CTNNA1-222	ENST00000520400	KDM1A	O60341	852 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	PRL	P01236	227 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	PTGS1	P23219	599 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	GPR3	P46089	330 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SCAND1	P57086	179 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SESN3	P58005	492 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	NKX3-2	P78367	333 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	FOXO4	P98177	505 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	LYSMD2	Q8IV50	215 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	HIPK4	Q8NE63	616 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	TGFBRAP1	Q8WUH2	860 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	MYL10	Q9BUA6	226 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	RNF38	Q9H0F5	515 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	TMPRSS11E	Q9UL52	423 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	ASB1	Q9Y576	335 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	PPP2R3B	Q9Y5P8	575 aa		6.26	□□□□□ -1.41
CTNNA1-222	ENST00000520400	PCDHGA12	O60330	932 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	ULK1	O75385	1050 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	ALDH1L1	O75891	902 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	MT-CO1	P00395	513 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	COL6A1	P12109	1028 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	LSP1	P33241	339 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	GLRB	P48167	497 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SLC6A3	Q01959	620 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	ALDH6A1	Q02252	535 aa	Known RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	DLX2	Q07687	328 aa	Predicted RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	MCL1	Q07820	350 aa		6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	SMAD4	Q13485	552 aa	Known RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	TTF1	Q15361	905 aa	Predicted RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	PCBP2	Q15366	365 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	CXorf67	Q86X51	503 aa	Predicted RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	FBXO15	Q8NCQ5	510 aa	Predicted RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	AHCYL2	Q96HN2	611 aa	Known RBP	6.25	□□□□□ -1.41
CTNNA1-222	ENST00000520400	C11orf84	Q9BUA3	381 aa	Predicted RBP	6.25	□□□□□ -1.41

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