RNA–Protein interactions for RNA: ENST00000509014.2

CALCOCO2-212, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-212ENST00000509014 RFC4P35249 363 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 GALK1P51570 392 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 NFE2L2Q16236 605 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 SLC35F1Q5T1Q4 408 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 HLA-DQA1Q5Y7H0 255 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 OSBP2Q969R2 916 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 TESK2Q96S53 571 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 IER2Q9BTL4 223 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 CARD11Q9BXL7 1154 aa6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
CALCOCO2-212ENST00000509014 CNTNAP1P78357 1384 aa6.96□□□□□ -1.29
CALCOCO2-212ENST00000509014 COL11A2P13942 1736 aaPredicted RBP6.96□□□□□ -1.29
CALCOCO2-212ENST00000509014 SCN11AQ9UI33 1791 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ARFGEF2Q9Y6D5 1785 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 POLRMTO00411 1230 aaKnown RBP6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 IGSF3O75054 1194 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 TBC1D8O95759 1140 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 FAM153BP0C7A2 387 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 PAMP19021 973 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ECI1P42126 302 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 SLC14A2Q15849 920 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 CPNE8Q86YQ8 564 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 IFNL2Q8IZJ0 200 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 LILRB2Q8N423 598 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ZBTB38Q8NAP3 1195 aaPredicted RBP6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 FAM168AQ92567 244 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ABHD8Q96I13 439 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 CCDC140Q96MF4 163 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 IMPACTQ9P2X3 320 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 TMEFF2Q9UIK5 374 aaPredicted RBP6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 GPR160Q9UJ42 338 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ACSL6Q9UKU0 697 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 TAF6LQ9Y6J9 622 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 PDE4DIPQ5VU43 2346 aa6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 USP42Q9H9J4 1324 aaKnown RBP6.96□□□□□ -1.3
CALCOCO2-212ENST00000509014 ADAMTSL1Q8N6G6 1762 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 SLX4Q8IY92 1834 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 TRAV20A0A0B4J274 112 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 NPHP3-ACAD11A0A0J9YXS1 232 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 PRODHO43272 600 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 CPP00450 1065 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 GLI1P08151 1106 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 MSL3P1P0C860 447 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 PABPC1P11940 636 aaKnown RBP6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 KCNJ6P48051 423 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 CTCFP49711 727 aaPredicted RBP6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 LBX1P52954 281 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 MAP4K2Q12851 820 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 LAPTM5Q13571 262 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 SNX17Q15036 470 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 TESK1Q15569 626 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 KCNMB1Q16558 191 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 INF2Q27J81 1249 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 GALNT18Q6P9A2 607 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 MMP19Q99542 508 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 PASKQ96RG2 1323 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 CASP8AP2Q9UKL3 1982 aa6.95□□□□□ -1.3
CALCOCO2-212ENST00000509014 ERVV-2B6SEH9 535 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 HSPA8P11142 646 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 L1CAMP32004 1257 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 CRKLP46109 303 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 RGS19P49795 217 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 MVKQ03426 396 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 NTRK3Q16288 839 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 TMEM67Q5HYA8 995 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 ACBD5Q5T8D3 534 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 JAMLQ86YT9 394 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 KCTD13Q8WZ19 329 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 MRFAP1L1Q96HT8 127 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 EXOC2Q96KP1 924 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 CWC22Q9HCG8 908 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 TRPM7Q96QT4 1865 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 THSD7BQ9C0I4 1608 aa6.94□□□□□ -1.3
CALCOCO2-212ENST00000509014 TRBV23OR9-2A0A075B6M9 112 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 C7orf72A4D263 438 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 PPP1R11O60927 126 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 PRKCAP17252 672 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 E4F1Q66K89 784 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 SIRT2Q8IXJ6 389 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 PPIL6Q8IXY8 311 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 NUP43Q8NFH3 380 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 LIN37Q96GY3 246 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 KANSL2Q9H9L4 492 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 CRTAC1Q9NQ79 661 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 FBLN5Q9UBX5 448 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 WASHC2AQ641Q2 1341 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 CARMIL3Q8ND23 1372 aa6.93□□□□□ -1.3
CALCOCO2-212ENST00000509014 ST20-MTHFSA0A0A6YYL1 179 aa6.92□□□□□ -1.3
CALCOCO2-212ENST00000509014 MEFVO15553 781 aaPredicted RBP6.92□□□□□ -1.3
CALCOCO2-212ENST00000509014 CORO7P57737 925 aa6.92□□□□□ -1.3
CALCOCO2-212ENST00000509014 LONRF2Q1L5Z9 754 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms