RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 PLEKHA8P1O95397 391 aa20.59■□□□□ 0.89
CLDND1-217ENST00000508071 BMP8AQ7Z5Y6 402 aa20.59■□□□□ 0.89
CLDND1-217ENST00000508071 RBM23Q86U06 439 aaKnown RBP20.59■□□□□ 0.89
CLDND1-217ENST00000508071 SRBD1Q8N5C6 995 aaKnown RBP20.59■□□□□ 0.89
CLDND1-217ENST00000508071 PBXIP1Q96AQ6 731 aa20.59■□□□□ 0.89
CLDND1-217ENST00000508071 CELF4Q9BZC1 486 aaKnown RBP20.59■□□□□ 0.89
CLDND1-217ENST00000508071 SLC9A2Q9UBY0 812 aa20.59■□□□□ 0.89
CLDND1-217ENST00000508071 PCDHA2Q9Y5H9 948 aa20.59■□□□□ 0.89
CLDND1-217ENST00000508071 PLXNA4Q9HCM2 1894 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 IGSF9BQ9UPX0 1349 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 ZDBF2Q9HCK1 2354 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 TMEM221A6NGB7 291 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 M0R296 226 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 IBSPP21815 317 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-217ENST00000508071 TRIM67Q6ZTA4 783 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 CMTR1Q8N1G2 835 aaKnown RBP20.58■□□□□ 0.89
CLDND1-217ENST00000508071 PCYT2Q99447 389 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 MTA3Q9BTC8 594 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 PCDHA6Q9UN73 950 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 PCDHA8Q9Y5H6 950 aa20.58■□□□□ 0.89
CLDND1-217ENST00000508071 CCDC69A6NI79 296 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 LOC730098B7Z3J9 87 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 PDE4AP27815 886 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 PLCB4Q15147 1175 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 PKN1Q16512 942 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 SPOUT1Q5T280 376 aaKnown RBP20.57■□□□□ 0.88
CLDND1-217ENST00000508071 TMTC2Q8N394 836 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 NME8Q8N427 588 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 MICAL1Q8TDZ2 1067 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 TRAPPC12Q8WVT3 735 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 SDF4Q9BRK5 362 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 TLE6Q9H808 572 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 BARX2Q9UMQ3 279 aaPredicted RBP20.57■□□□□ 0.88
CLDND1-217ENST00000508071 PCDHB12Q9Y5F1 795 aa20.57■□□□□ 0.88
CLDND1-217ENST00000508071 SGSM2O43147 1006 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PRC1O43663 620 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 CALM1P0DP23 149 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 CALM2P0DP24 149 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 CALM3P0DP25 149 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 GATMP50440 423 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 STAT5BP51692 787 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PTPN5P54829 565 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 ZXDAP98168 799 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 KRT76Q01546 638 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PLPPR4Q7Z2D5 763 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 SUGP1Q8IWZ8 645 aaKnown RBP20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PRSS33Q8NF86 280 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 MAP4K1Q92918 833 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PRRX2Q99811 253 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 TMX1Q9H3N1 280 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 AAASQ9NRG9 546 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 KCNH7Q9NS40 1196 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 USP15Q9Y4E8 981 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-217ENST00000508071 PCDHB7Q9Y5E2 793 aa20.56■□□□□ 0.88
CLDND1-217ENST00000508071 RBM8AQ9Y5S9 174 aaKnown RBP20.56■□□□□ 0.88
CLDND1-217ENST00000508071 KDM3AQ9Y4C1 1321 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 SMIM35A0A1B0GVV1 85 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 hCG_1642624A0A1W2PR95 340 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 GLP2RO95838 553 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 RXRAP19793 462 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 MCM5P33992 734 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 SARSP49591 514 aaKnown RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 ACTR2P61160 394 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 NFX1Q12986 1120 aaKnown RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 CBX2Q14781 532 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 TMEM266Q2M3C6 531 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 MTHFD1LQ6UB35 978 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 HEATR3Q7Z4Q2 680 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 MXRA8Q9BRK3 442 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 PHF7Q9BWX1 381 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 RNF216Q9NWF9 866 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 PCDHGC5Q9Y5F6 944 aa20.55■□□□□ 0.88
CLDND1-217ENST00000508071 FNDC1Q4ZHG4 1894 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-217ENST00000508071 NFASCO94856 1347 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 SH2B2O14492 632 aaPredicted RBP20.54■□□□□ 0.88
CLDND1-217ENST00000508071 UBE3AQ05086 875 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 FAM43BQ6ZT52 329 aaPredicted RBP20.54■□□□□ 0.88
CLDND1-217ENST00000508071 CCDC82Q8N4S0 544 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 TMEM87BQ96K49 555 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 PHOX2BQ99453 314 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 GINS2Q9Y248 185 aa20.54■□□□□ 0.88
CLDND1-217ENST00000508071 FSD2A1L4K1 749 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 TBKBP1A7MCY6 615 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 IER5LQ5T953 404 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 RPGRIP1Q96KN7 1286 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 TLR9Q9NR96 1032 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 SLC12A7Q9Y666 1083 aa20.53■□□□□ 0.88
CLDND1-217ENST00000508071 DENND3A2RUS2 1198 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 PER2O15055 1255 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 RPS6KA5O75582 802 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 LIFRP42702 1097 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 SLC26A2P50443 739 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 ODR4Q5SWX8 454 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 FBXL6Q8N531 539 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 CYP2W1Q8TAV3 490 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 CDCA3Q99618 268 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-217ENST00000508071 ERVK-5Q9HDB9 667 aa20.52■□□□□ 0.88
CLDND1-217ENST00000508071 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms