RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
CLDND1-208ENST00000503004 CTAGE4Q8IX94 777 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 BCAS4Q8TDM0 211 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 BICD1Q96G01 975 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ARPC5LQ9BPX5 153 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ZCWPW1Q9H0M4 648 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 NDST4Q9H3R1 872 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 HAUS4Q9H6D7 363 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 ATP6V0A4Q9HBG4 840 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 RIC8AQ9NPQ8 531 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 HOMER3Q9NSC5 361 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PCDHA12Q9UN75 941 aa5.66□□□□□ -1.5
CLDND1-208ENST00000503004 PLIN4Q96Q06 1357 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 ADAMTSL1Q8N6G6 1762 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 NPHP3-ACAD11A0A0J9YXS1 232 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 A0A1B0GVG6 124 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 POTEB3A0JP26 581 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 POTECB2RU33 542 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 SHOX2O60902 331 aaPredicted RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 PRPF6O94906 941 aaKnown RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 GDF11O95390 407 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 STAT3P40763 770 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 APBA1Q02410 837 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 E2F5Q15329 346 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 QRICH1Q2TAL8 776 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 FKBP15Q5T1M5 1219 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 CWF19L1Q69YN2 538 aaKnown RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 POTEBQ6S5H4 581 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 NELFCDQ8IXH7 590 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 RAD54LQ92698 747 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 GLMNQ92990 594 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 CUL5Q93034 780 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 TEKT1Q969V4 418 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 JAKMIP2Q96AA8 810 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 CCDC42Q96M95 316 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 MMS19Q96T76 1030 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 PSMB7Q99436 277 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 RAB34Q9BZG1 259 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 TANGO6Q9C0B7 1094 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 MMADHCQ9H3L0 296 aaPredicted RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 ACBD3Q9H3P7 528 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 QTRT2Q9H974 415 aaKnown RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 ZNHIT6Q9NWK9 470 aaKnown RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 ARHGAP20Q9P2F6 1191 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 MYO1AQ9UBC5 1043 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 TRPC5Q9UL62 973 aaPredicted RBP5.65□□□□□ -1.5
CLDND1-208ENST00000503004 PCDHGC5Q9Y5F6 944 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 PCDHA1Q9Y5I3 950 aa5.65□□□□□ -1.5
CLDND1-208ENST00000503004 PSMD14O00487 310 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 KRT86O43790 486 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 HLA-DOAP06340 250 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 EEF2P13639 858 aaKnown RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 HSPA1LP34931 641 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 SLC1A4P43007 532 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 CRKP46108 304 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 MAP2K5Q13163 448 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 USH1GQ495M9 461 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 VWA3BQ502W6 1294 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 PPP4R3AQ6IN85 833 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 MIS18BP1Q6P0N0 1132 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 LRRC55Q6ZSA7 311 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 TRAPPC11Q7Z392 1133 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 COL23A1Q86Y22 540 aaPredicted RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 FAM114A1Q8IWE2 563 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 GSPT2Q8IYD1 628 aaKnown RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 ANKRD13CQ8N6S4 541 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 NOC3LQ8WTT2 800 aaKnown RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 HNRNPLLQ8WVV9 542 aaKnown RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 DNAJC19Q96DA6 116 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 ERGIC2Q96RQ1 377 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.51
CLDND1-208ENST00000503004 PHACTR1Q9C0D0 580 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 YIPF3Q9GZM5 350 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 ZHX3Q9H4I2 956 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 STK17AQ9UEE5 414 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 KIAA1024Q9UPX6 916 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 SAR1BQ9Y6B6 198 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 CAPN6Q9Y6Q1 641 aa5.65□□□□□ -1.51
CLDND1-208ENST00000503004 PVALEFA0A1B0GWK0 134 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 LRRC53A6NM62 1247 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 hCG_1984214I3L0E3 225 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 ERLIN1O75477 346 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 SYF2O95926 243 aaKnown RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 FESP07332 822 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 MMP10P09238 476 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 CYLC1P35663 651 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 KRT83P78385 493 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 COASYQ13057 564 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 SEPT2Q15019 361 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 WHAMMP3Q1A5X7 153 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 ACCSLQ4AC99 568 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 SLC27A3Q5K4L6 730 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 GPATCH4Q5T3I0 446 aaKnown RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 RNF187Q5TA31 235 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 SLC30A10Q6XR72 485 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 RRAGAQ7L523 313 aa5.64□□□□□ -1.51
CLDND1-208ENST00000503004 GUF1Q8N442 669 aaKnown RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 ZNF713Q8N859 430 aaPredicted RBP5.64□□□□□ -1.51
CLDND1-208ENST00000503004 NUP58Q9BVL2 599 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms