RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 SYMPKQ92797 1274 aaKnown RBP10.91□□□□□ -0.66
MSH5-218ENST00000494646 TGS1Q96RS0 853 aaKnown RBP10.91□□□□□ -0.66
MSH5-218ENST00000494646 C17orf80Q9BSJ5 609 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 ZNF577Q9BSK1 485 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
MSH5-218ENST00000494646 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 THEGQ9P2T0 379 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 NLRC5Q86WI3 1866 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 ESYT2A0FGR8 921 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 MBLAC1A4D2B0 266 aaPredicted RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 IPO5O00410 1097 aaKnown RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 ENPP3O14638 875 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 EDIL3O43854 480 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 POU3F3P20264 500 aaPredicted RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 ATP4AP20648 1035 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 KLRC1P26715 233 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 CD52P31358 61 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 EVCP57679 992 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 ERVK-21P61565 698 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 MRPS5P82675 430 aaKnown RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 MRPS6P82932 125 aaKnown RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 HTRA4P83105 476 aaPredicted RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 PRR16Q569H4 304 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 FBXO47Q5MNV8 452 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 NIPA1Q7RTP0 329 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 RPAINQ86UA6 219 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 CCDC60Q8IWA6 550 aaPredicted RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 BICD2Q8TD16 824 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 ATXN2LQ8WWM7 1075 aaKnown RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 CRYGNQ8WXF5 182 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 APBB2Q92870 758 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
MSH5-218ENST00000494646 ASB2Q96Q27 587 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 YME1L1Q96TA2 773 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 ZNF302Q9NR11 478 aa10.9□□□□□ -0.66
MSH5-218ENST00000494646 NID2Q14112 1375 aa10.9□□□□□ -0.67
MSH5-218ENST00000494646 MUC3AQ02505 3323 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 MYO7AQ13402 2215 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 IGKV6D-21A0A0A0MT36 114 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 CPLX1O14810 134 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 EPB41L2O43491 1005 aaKnown RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 IBSPP21815 317 aaPredicted RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 IER5Q5VY09 327 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 FAM160B1Q5W0V3 765 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 MCTP2Q6DN12 878 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 MIS18BP1Q6P0N0 1132 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 PDXDC2PQ6P474 469 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 MTHFD1LQ6UB35 978 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 CKAP2LQ8IYA6 745 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 TRIM22Q8IYM9 498 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 CCDC148Q8NFR7 591 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 GJA10Q969M2 543 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 ZNF274Q96GC6 653 aaPredicted RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 AIFM3Q96NN9 605 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 AGO3Q9H9G7 860 aaKnown RBP10.89□□□□□ -0.67
MSH5-218ENST00000494646 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 TBC1D22BQ9NU19 505 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 GINS2Q9Y248 185 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 SAMM50Q9Y512 469 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 PCDHA2Q9Y5H9 948 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 TTC3P53804 2025 aa10.89□□□□□ -0.67
MSH5-218ENST00000494646 HBP1O60381 514 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 EPC2Q52LR7 807 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 TBCKQ8TEA7 893 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 ATP8B4Q8TF62 1192 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 IL17RAQ96F46 866 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 CELF4Q9BZC1 486 aaKnown RBP10.88□□□□□ -0.67
MSH5-218ENST00000494646 GABBR1Q9UBS5 961 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 PADI3Q9ULW8 664 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 KCNJ14Q9UNX9 436 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 TRPV2Q9Y5S1 764 aa10.88□□□□□ -0.67
MSH5-218ENST00000494646 SMIM35A0A1B0GVV1 85 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 M0QZ92 97 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 MSH4O15457 936 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 DEXIO95424 95 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 PSAPP07602 524 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 CIITAP33076 1130 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 SLC26A2P50443 739 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 USP11P51784 963 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 KCNQ1P51787 676 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 KRT76Q01546 638 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 SCRN1Q12765 414 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 NFX1Q12986 1120 aaKnown RBP10.87□□□□□ -0.67
MSH5-218ENST00000494646 GPM6BQ13491 265 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 TMEM266Q2M3C6 531 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 ZNF484Q5JVG2 852 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 ZNF746Q6NUN9 644 aaPredicted RBP10.87□□□□□ -0.67
MSH5-218ENST00000494646 CPLX2Q6PUV4 134 aaKnown RBP10.87□□□□□ -0.67
MSH5-218ENST00000494646 TSHZ1Q6ZSZ6 1077 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 TMEM192Q8IY95 271 aa10.87□□□□□ -0.67
MSH5-218ENST00000494646 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms