RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 UBE2ZQ9H832 354 aaPredicted RBP9.43□□□□□ -0.9
APP-216ENST00000491395 BRWD1Q9NSI6 2320 aa9.42□□□□□ -0.9
APP-216ENST00000491395 SMIM35A0A1B0GVV1 85 aa9.42□□□□□ -0.9
APP-216ENST00000491395 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
APP-216ENST00000491395 IPO5O00410 1097 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 ATP4AP20648 1035 aa9.42□□□□□ -0.9
APP-216ENST00000491395 KCNA5P22460 613 aa9.42□□□□□ -0.9
APP-216ENST00000491395 PSMA5P28066 241 aa9.42□□□□□ -0.9
APP-216ENST00000491395 PDIA3P30101 505 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 CTNNB1P35222 781 aa9.42□□□□□ -0.9
APP-216ENST00000491395 BMPR1AP36894 532 aa9.42□□□□□ -0.9
APP-216ENST00000491395 SLC26A2P50443 739 aa9.42□□□□□ -0.9
APP-216ENST00000491395 AKAP17AQ02040 695 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 NTRK3Q16288 839 aa9.42□□□□□ -0.9
APP-216ENST00000491395 FAM160B1Q5W0V3 765 aa9.42□□□□□ -0.9
APP-216ENST00000491395 MIS18BP1Q6P0N0 1132 aa9.42□□□□□ -0.9
APP-216ENST00000491395 KIAA0319LQ8IZA0 1049 aa9.42□□□□□ -0.9
APP-216ENST00000491395 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 FBXL16Q8N461 479 aa9.42□□□□□ -0.9
APP-216ENST00000491395 ATP8B4Q8TF62 1192 aa9.42□□□□□ -0.9
APP-216ENST00000491395 CCDC12Q8WUD4 166 aaPredicted RBP9.42□□□□□ -0.9
APP-216ENST00000491395 TNPO1Q92973 898 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 ZNF577Q9BSK1 485 aa9.42□□□□□ -0.9
APP-216ENST00000491395 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
APP-216ENST00000491395 AGXT2Q9BYV1 514 aa9.42□□□□□ -0.9
APP-216ENST00000491395 CELF4Q9BZC1 486 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
APP-216ENST00000491395 RC3H2Q9HBD1 1191 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 NCOA5Q9HCD5 579 aaKnown RBP9.42□□□□□ -0.9
APP-216ENST00000491395 ZNF302Q9NR11 478 aa9.42□□□□□ -0.9
APP-216ENST00000491395 RAPGEFL1Q9UHV5 662 aa9.42□□□□□ -0.9
APP-216ENST00000491395 PADI3Q9ULW8 664 aa9.42□□□□□ -0.9
APP-216ENST00000491395 TRPV2Q9Y5S1 764 aa9.42□□□□□ -0.9
APP-216ENST00000491395 PTPRSQ13332 1948 aa9.42□□□□□ -0.9
APP-216ENST00000491395 ZBTB42B2RXF5 422 aa9.41□□□□□ -0.9
APP-216ENST00000491395 M0QZ92 97 aa9.41□□□□□ -0.9
APP-216ENST00000491395 GRM6O15303 877 aa9.41□□□□□ -0.9
APP-216ENST00000491395 EDIL3O43854 480 aa9.41□□□□□ -0.9
APP-216ENST00000491395 HBP1O60381 514 aa9.41□□□□□ -0.9
APP-216ENST00000491395 DGKIO75912 1065 aa9.41□□□□□ -0.9
APP-216ENST00000491395 REC8O95072 547 aa9.41□□□□□ -0.9
APP-216ENST00000491395 RPLP2P05387 115 aaKnown RBP9.41□□□□□ -0.9
APP-216ENST00000491395 LINC00271P0C7V0 271 aa9.41□□□□□ -0.9
APP-216ENST00000491395 IFNAR1P17181 557 aa9.41□□□□□ -0.9
APP-216ENST00000491395 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
APP-216ENST00000491395 GNA11P29992 359 aa9.41□□□□□ -0.9
APP-216ENST00000491395 KRT76Q01546 638 aa9.41□□□□□ -0.9
APP-216ENST00000491395 PAK2Q13177 524 aa9.41□□□□□ -0.9
APP-216ENST00000491395 BTG3Q14201 252 aaPredicted RBP9.41□□□□□ -0.9
APP-216ENST00000491395 TMEM266Q2M3C6 531 aa9.41□□□□□ -0.9
APP-216ENST00000491395 LEXMQ3ZCV2 418 aa9.41□□□□□ -0.9
APP-216ENST00000491395 PRR16Q569H4 304 aa9.41□□□□□ -0.9
APP-216ENST00000491395 TCEAL5Q5H9L2 206 aa9.41□□□□□ -0.9
APP-216ENST00000491395 ZNF484Q5JVG2 852 aa9.41□□□□□ -0.9
APP-216ENST00000491395 MCTP2Q6DN12 878 aa9.41□□□□□ -0.9
APP-216ENST00000491395 PDXDC2PQ6P474 469 aa9.41□□□□□ -0.9
APP-216ENST00000491395 TRMT1LQ7Z2T5 733 aaKnown RBP9.41□□□□□ -0.9
APP-216ENST00000491395 NME8Q8N427 588 aa9.41□□□□□ -0.9
APP-216ENST00000491395 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
APP-216ENST00000491395 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.41□□□□□ -0.9
APP-216ENST00000491395 ZNF689Q96CS4 500 aaPredicted RBP9.41□□□□□ -0.9
APP-216ENST00000491395 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
APP-216ENST00000491395 TMX1Q9H3N1 280 aa9.41□□□□□ -0.9
APP-216ENST00000491395 TBC1D22BQ9NU19 505 aa9.41□□□□□ -0.9
APP-216ENST00000491395 VPS54Q9P1Q0 977 aa9.41□□□□□ -0.9
APP-216ENST00000491395 GINS2Q9Y248 185 aa9.41□□□□□ -0.9
APP-216ENST00000491395 SQORQ9Y6N5 450 aa9.41□□□□□ -0.9
APP-216ENST00000491395 DOCK5Q9H7D0 1870 aa9.4□□□□□ -0.9
APP-216ENST00000491395 NID2Q14112 1375 aa9.4□□□□□ -0.9
APP-216ENST00000491395 ADGRA3Q8IWK6 1321 aa9.4□□□□□ -0.9
APP-216ENST00000491395 IGSF9BQ9UPX0 1349 aa9.4□□□□□ -0.9
APP-216ENST00000491395 KDM3AQ9Y4C1 1321 aa9.4□□□□□ -0.9
APP-216ENST00000491395 C5orf67F2Z3F1 127 aa9.4□□□□□ -0.9
APP-216ENST00000491395 H3BQ06 376 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 RB1P06400 928 aa9.4□□□□□ -0.9
APP-216ENST00000491395 PRKCSHP14314 528 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 COL9A1P20849 921 aa9.4□□□□□ -0.9
APP-216ENST00000491395 CIITAP33076 1130 aa9.4□□□□□ -0.9
APP-216ENST00000491395 GATMP50440 423 aa9.4□□□□□ -0.9
APP-216ENST00000491395 EVCP57679 992 aa9.4□□□□□ -0.9
APP-216ENST00000491395 TOB2Q14106 344 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 TIGD5Q53EQ6 642 aa9.4□□□□□ -0.9
APP-216ENST00000491395 ZNF746Q6NUN9 644 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
APP-216ENST00000491395 CKAP2LQ8IYA6 745 aa9.4□□□□□ -0.9
APP-216ENST00000491395 CRIPAKQ8N1N5 446 aa9.4□□□□□ -0.9
APP-216ENST00000491395 BICD2Q8TD16 824 aa9.4□□□□□ -0.9
APP-216ENST00000491395 TMEM40Q8WWA1 233 aa9.4□□□□□ -0.9
APP-216ENST00000491395 CLP1Q92989 425 aaKnown RBP9.4□□□□□ -0.9
APP-216ENST00000491395 LENG9Q96B70 501 aa9.4□□□□□ -0.9
APP-216ENST00000491395 FTHL17Q9BXU8 183 aa9.4□□□□□ -0.9
APP-216ENST00000491395 RNF26Q9BY78 433 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 EPHX3Q9H6B9 360 aa9.4□□□□□ -0.9
APP-216ENST00000491395 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
APP-216ENST00000491395 CD320Q9NPF0 282 aa9.4□□□□□ -0.9
APP-216ENST00000491395 GABBR1Q9UBS5 961 aa9.4□□□□□ -0.9
APP-216ENST00000491395 NOC2LQ9Y3T9 749 aaKnown RBP9.4□□□□□ -0.9
APP-216ENST00000491395 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
APP-216ENST00000491395 MRPL42Q9Y6G3 142 aaKnown RBP9.4□□□□□ -0.9
APP-216ENST00000491395 MYO7AQ13402 2215 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms