RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 LXNQ9BS40 222 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 SCAND2PQ9GZW5 306 aaPredicted RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 ZSWIM4Q9H7M6 989 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 NRBP2Q9NSY0 501 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.37
NUP50-216ENST00000486184 MAFBQ9Y5Q3 323 aaPredicted RBP12.77□□□□□ -0.37
NUP50-216ENST00000486184 C17orf102A2RUQ5 167 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 DCDC2CA8MYV0 355 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 HAS3O00219 553 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 HBP1O60381 514 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 PPP6R2O75170 966 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 OATP04181 439 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 SMIM10L2AP0DMW4 78 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 SMIM10L2BP0DMW5 78 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 ME1P48163 572 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 PPFIA1Q13136 1202 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 PLCB4Q15147 1175 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 ZRSR1Q15695 479 aaKnown RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 UGCGQ16739 394 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 IGSF22Q8N9C0 903 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 ATP8B4Q8TF62 1192 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 BBXQ8WY36 941 aaPredicted RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 TUFT1Q9NNX1 390 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 SEPT9Q9UHD8 586 aaPredicted RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
NUP50-216ENST00000486184 KDM3AQ9Y4C1 1321 aa12.76□□□□□ -0.37
NUP50-216ENST00000486184 DDX11L8A8MPP1 907 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 COL1A2P08123 1366 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 UBA7P41226 1012 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 RTP1P59025 263 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 IGBP1P78318 339 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 IL17AQ16552 155 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 TRIM60Q495X7 471 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 XKR3Q5GH77 459 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 C1orf53Q5VUE5 145 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 OTUD6AQ7L8S5 288 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 EVPLQ92817 2033 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 CALML4Q96GE6 196 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
NUP50-216ENST00000486184 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 RNPEPQ9H4A4 650 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 HDAC6Q9UBN7 1215 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 GTF2IRD1Q9UHL9 959 aa12.75□□□□□ -0.37
NUP50-216ENST00000486184 FBXO2Q9UK22 296 aaPredicted RBP12.75□□□□□ -0.37
NUP50-216ENST00000486184 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
NUP50-216ENST00000486184 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 CUTAO60888 179 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 MUTP22033 750 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 RPA1P27694 616 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 SNX17Q15036 470 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 GRIK4Q16099 956 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 PTGISQ16647 500 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 LRRC26Q2I0M4 334 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 ZNF484Q5JVG2 852 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 CABP7Q86V35 215 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 C4orf19Q8IY42 314 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 PPP1R13LQ8WUF5 828 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 DPF3Q92784 378 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 CSRNP2Q9H175 543 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
NUP50-216ENST00000486184 GRIN2DO15399 1336 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 MYH11P35749 1972 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 SLC26A4O43511 780 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 ZNF862O60290 1169 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 EVI5O60447 810 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 MED24O75448 989 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 SLITRK3O94933 977 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 INSRRP14616 1297 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 CDC25AP30304 524 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 YWHABP31946 246 aaKnown RBP12.73□□□□□ -0.37
NUP50-216ENST00000486184 MTERF2Q49AM1 385 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 CATSPER3Q86XQ3 398 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 LEO1Q8WVC0 666 aaPredicted RBP12.73□□□□□ -0.37
NUP50-216ENST00000486184 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 TUBE1Q9UJT0 475 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 RCOR1Q9UKL0 485 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 KIAA1024Q9UPX6 916 aa12.73□□□□□ -0.37
NUP50-216ENST00000486184 TANC1Q9C0D5 1861 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 B4GALT4O60513 344 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 LYPLA2O95372 231 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 CLTBP09497 229 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 ATP4AP20648 1035 aa12.72□□□□□ -0.37
NUP50-216ENST00000486184 CDK7P50613 346 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms