RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 PDGFDQ9GZP0 370 aaPredicted RBP7.06□□□□□ -1.28
PRKD3-208ENST00000475912 DLL4Q9NR61 685 aa7.06□□□□□ -1.28
PRKD3-208ENST00000475912 SRPK3Q9UPE1 567 aa7.06□□□□□ -1.28
PRKD3-208ENST00000475912 PTCH2Q9Y6C5 1203 aa7.06□□□□□ -1.28
PRKD3-208ENST00000475912 NCOA1Q15788 1441 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 CYP7B1O75881 506 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 AMY2AP04746 511 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 CKMP06732 381 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 CELA3BP08861 270 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 PDE6AP16499 860 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 NAT1P18440 290 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 AMY2BP19961 511 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 DNM2P50570 870 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 ST5P78524 1137 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 KIAA2012Q0VF49 1180 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 BMS1Q14692 1282 aaKnown RBP7.05□□□□□ -1.28
PRKD3-208ENST00000475912 C2orf27AQ580R0 203 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 TRMT10BQ6PF06 316 aaKnown RBP7.05□□□□□ -1.28
PRKD3-208ENST00000475912 OSTM1Q86WC4 334 aa7.05□□□□□ -1.28
PRKD3-208ENST00000475912 PTRH1Q86Y79 214 aaKnown RBP7.05□□□□□ -1.28
PRKD3-208ENST00000475912 YTHDC1Q96MU7 727 aaKnown RBP7.05□□□□□ -1.28
PRKD3-208ENST00000475912 CDK11AQ9UQ88 783 aaPredicted RBP7.05□□□□□ -1.28
PRKD3-208ENST00000475912 ZNF335Q9H4Z2 1342 aaPredicted RBP7.04□□□□□ -1.28
PRKD3-208ENST00000475912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.04□□□□□ -1.28
PRKD3-208ENST00000475912 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 MAN2B1O00754 1011 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 RASGRP1O95267 797 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 GLRBP48167 497 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 JAM2P57087 298 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 PLP2Q04941 152 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 SKIDA1Q1XH10 827 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 BTBD8Q5XKL5 378 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 C16orf59Q7L2K0 433 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 FAM124AQ86V42 546 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 GSTCDQ8NEC7 633 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 SLC7A14Q8TBB6 771 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 LCORQ96JN0 433 aaPredicted RBP7.04□□□□□ -1.28
PRKD3-208ENST00000475912 TMEM168Q9H0V1 697 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 SFMBT1Q9UHJ3 866 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 ZFP69BQ9UJL9 534 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 ATP10AO60312 1499 aa7.04□□□□□ -1.28
PRKD3-208ENST00000475912 NUP153P49790 1475 aaKnown RBP7.04□□□□□ -1.28
PRKD3-208ENST00000475912 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRKD3-208ENST00000475912 FAM90A27PA6NNH2 459 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 KCNK3O14649 394 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 EFCAB14O75071 495 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 ENO2P09104 434 aaPredicted RBP7.03□□□□□ -1.28
PRKD3-208ENST00000475912 COL6A1P12109 1028 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 PTPN1P18031 435 aaKnown RBP7.03□□□□□ -1.28
PRKD3-208ENST00000475912 HSPA1LP34931 641 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 PFKPQ01813 784 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 CRY1Q16526 586 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 FAM47CQ5HY64 1035 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 NLGN4XQ8N0W4 816 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 CISD2Q8N5K1 135 aaKnown RBP7.03□□□□□ -1.28
PRKD3-208ENST00000475912 RIC8BQ9NVN3 520 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 FTSJ1Q9UET6 329 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 INVSQ9Y283 1065 aa7.03□□□□□ -1.28
PRKD3-208ENST00000475912 RAPGEF6Q8TEU7 1601 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-208ENST00000475912 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 ZNF839A8K0R7 811 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 ZNF561-AS1K7EIQ3 104 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 NFE2L2Q16236 605 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 TRIM61Q5EBN2 209 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 FIGNQ5HY92 759 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 BRAPQ7Z569 592 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 LGI4Q8N135 537 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 STPG3Q8N7X2 389 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 NUDT10Q8NFP7 164 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 MBD6Q96DN6 1003 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 NUDT11Q96G61 164 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 SCLYQ96I15 445 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 MAGEB10Q96LZ2 347 aaPredicted RBP7.02□□□□□ -1.29
PRKD3-208ENST00000475912 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 SLC39A2Q9NP94 309 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 ARHGAP20Q9P2F6 1191 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 COQ6Q9Y2Z9 468 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 ATP23Q9Y6H3 246 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 CFAP74Q9C0B2 1584 aa7.02□□□□□ -1.29
PRKD3-208ENST00000475912 SCAPERQ9BY12 1400 aa7.01□□□□□ -1.29
PRKD3-208ENST00000475912 GSTA4O15217 222 aa7.01□□□□□ -1.29
PRKD3-208ENST00000475912 FBXO21O94952 628 aa7.01□□□□□ -1.29
PRKD3-208ENST00000475912 DBPQ10586 325 aaPredicted RBP7.01□□□□□ -1.29
PRKD3-208ENST00000475912 SMAD2Q15796 467 aaKnown RBP7.01□□□□□ -1.29
PRKD3-208ENST00000475912 EP400NLQ6ZTU2 488 aa7.01□□□□□ -1.29
PRKD3-208ENST00000475912 DRC1Q96MC2 740 aa7.01□□□□□ -1.29
PRKD3-208ENST00000475912 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
PRKD3-208ENST00000475912 C3P01024 1663 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 CCDC163A0A0D9SF12 145 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 B4GALT3O60512 393 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 IL18BPO95998 194 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 FGD2Q7Z6J4 655 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 PRRT2Q7Z6L0 340 aaPredicted RBP7□□□□□ -1.29
PRKD3-208ENST00000475912 MRFAP1L1Q96HT8 127 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 TACO1Q9BSH4 297 aaKnown RBP7□□□□□ -1.29
PRKD3-208ENST00000475912 ZSWIM4Q9H7M6 989 aa7□□□□□ -1.29
PRKD3-208ENST00000475912 NCOA5Q9HCD5 579 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms