RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TCEAL6Q6IPX3 200 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 MRPL43Q8N983 215 aaKnown RBP7.9□□□□□ -1.14
HDAC3-206ENST00000471968 LINC01599Q8WXQ3 324 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 TCEAL3Q969E4 200 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 CLDN23Q96B33 292 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 CCDC17Q96LX7 622 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 PCGF6Q9BYE7 350 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 FAM217BQ9NTX9 383 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-206ENST00000471968 EPS15L1Q9UBC2 864 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 FEM1BQ9UK73 627 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
HDAC3-206ENST00000471968 CHURC1-FNTBB4DL54 471 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 NCAM2O15394 837 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 LILRB3O75022 631 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 CSRP1P21291 193 aaKnown RBP7.89□□□□□ -1.15
HDAC3-206ENST00000471968 RPS9P46781 194 aaKnown RBP7.89□□□□□ -1.15
HDAC3-206ENST00000471968 FNTBP49356 437 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 PLCB3Q01970 1234 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 TFCP2Q12800 502 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 SLC44A4Q53GD3 710 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 COLEC12Q5KU26 742 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 TMEM87AQ8NBN3 555 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 DEFB124Q8NES8 71 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 MDM1Q8TC05 714 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 SFXN1Q9H9B4 322 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 JADE2Q9NQC1 790 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 TYW1Q9NV66 732 aaKnown RBP7.89□□□□□ -1.15
HDAC3-206ENST00000471968 LRFN2Q9ULH4 789 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 ISY1Q9ULR0 285 aaKnown RBP7.89□□□□□ -1.15
HDAC3-206ENST00000471968 NUMBLQ9Y6R0 609 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 SHROOM3Q8TF72 1996 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 LCTP09848 1927 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 GREB1Q4ZG55 1949 aa7.89□□□□□ -1.15
HDAC3-206ENST00000471968 LOC102724159A0A0B4J2E5 919 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 SHISA7A6NL88 538 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 TBKBP1A7MCY6 615 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 APAF1O14727 1248 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CAPN9O14815 690 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CHRNA1P02708 482 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 UQCRFS1P1P0C7P4 283 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CNR2P34972 360 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 SNAP25P60880 206 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CFHR1Q03591 330 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 LPIN1Q14693 890 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 PWP2Q15269 919 aaKnown RBP7.88□□□□□ -1.15
HDAC3-206ENST00000471968 FAM26DQ5JW98 314 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CCDC62Q6P9F0 684 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 CHCHD4Q8N4Q1 142 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 FAM181AQ8N9Y4 354 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 GLG1Q92896 1179 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 USP26Q9BXU7 913 aa7.88□□□□□ -1.15
HDAC3-206ENST00000471968 PIH1D3Q9NQM4 214 aaKnown RBP7.88□□□□□ -1.15
HDAC3-206ENST00000471968 PTPDC1A2A3K4 754 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 FAM221BA6H8Z2 402 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 IDH1O75874 414 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 EPN2O95208 641 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 FDX1P10109 184 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 SCG2P13521 617 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 CALML3P27482 149 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 PDE4AP27815 886 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 PBX3P40426 434 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 KRT17Q04695 432 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 HTR4Q13639 388 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 WDR43Q15061 677 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 PLA2G2CQ5R387 149 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 HEATR6Q6AI08 1181 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 RSPO2Q6UXX9 243 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 SEPT14Q6ZU15 432 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 RTN4RL1Q86UN2 441 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 LSM14AQ8ND56 463 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 STAMQ92783 540 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 MPHOSPH6Q99547 160 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 SLC4A5Q9BY07 1137 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 EHMT1Q9H9B1 1298 aa7.87□□□□□ -1.15
HDAC3-206ENST00000471968 URB1O60287 2271 aaKnown RBP7.87□□□□□ -1.15
HDAC3-206ENST00000471968 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 ZFHX3Q15911 3703 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 NRCAMQ92823 1304 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SPAARA0A1B0GVQ0 90 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 CAPN8A6NHC0 703 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 VAMP4O75379 141 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 CXCL14O95715 111 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SMIM10L2AP0DMW4 78 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SMIM10L2BP0DMW5 78 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 LAG3P18627 525 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 EDNRBP24530 442 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 MPLP40238 635 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 CDK8P49336 464 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 CCR3P51677 355 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SIM1P81133 766 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-206ENST00000471968 ATP8B2P98198 1209 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SATB1Q01826 763 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 IKQ13123 557 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-206ENST00000471968 FZD5Q13467 585 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SLC30A10Q6XR72 485 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 TPRG1Q6ZUI0 275 aa7.86□□□□□ -1.15
HDAC3-206ENST00000471968 SDR42E1Q8WUS8 393 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms